RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ESRRAP11474 423 aaPredicted RBP16.19■□□□□ 0.18
SEC13-218ENST00000490283 TSPAN8P19075 237 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 PIK3R1P27986 724 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 SOX3P41225 446 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 KRT6CP48668 564 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 RASA2Q15283 850 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 BNC2Q6ZN30 1099 aaPredicted RBP16.19■□□□□ 0.18
SEC13-218ENST00000490283 C16orf47Q6ZP98 133 aaPredicted RBP16.19■□□□□ 0.18
SEC13-218ENST00000490283 RTL4Q6ZR62 310 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 RPS27LQ71UM5 84 aaKnown RBP16.19■□□□□ 0.18
SEC13-218ENST00000490283 SLC29A4Q7RTT9 530 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 MDGA2Q7Z553 956 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 ZNF321PQ8N8H1 164 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 NUBPLQ8TB37 319 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 SLC22A8Q8TCC7 542 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 ZNF721Q8TF20 911 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 RIT1Q92963 219 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 MRPL1Q9BYD6 325 aaKnown RBP16.19■□□□□ 0.18
SEC13-218ENST00000490283 TXLNGYQ9BZA5 131 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 PPCSQ9HAB8 311 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 BRF2Q9HAW0 419 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 DCDC2Q9UHG0 476 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 CCDC151A5D8V7 595 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 TMEM200CA6NKL6 621 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 SBK3P0C264 359 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 PYGBP11216 843 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 HMOX2P30519 316 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 HSD17B3P37058 310 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 MAPK12P53778 367 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 GPR85P60893 370 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 ERVK-8P63133 956 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 PLGLB1Q02325 96 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 ZNF267Q14586 743 aaPredicted RBP16.18■□□□□ 0.18
SEC13-218ENST00000490283 MPEG1Q2M385 716 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 SPRED3Q2MJR0 410 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 ZNF678Q5SXM1 525 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 HIST2H2BCQ6DN03 193 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 LETMD1Q6P1Q0 360 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 RPTNQ6XPR3 784 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 RNF111Q6ZNA4 994 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 GPRIN3Q6ZVF9 776 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 SPPL2CQ8IUH8 684 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 SIAH3Q8IW03 269 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 EID3Q8N140 333 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 METTL4Q8N3J2 472 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 TMEM151AQ8N4L1 468 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.18■□□□□ 0.18
SEC13-218ENST00000490283 CCDC126Q96EE4 140 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 SGCZQ96LD1 299 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 RYDENQ9NUL5 291 aaKnown RBP16.18■□□□□ 0.18
SEC13-218ENST00000490283 ERVK-19Q9WJR5 959 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 ZGRF1Q86YA3 2104 aa16.18■□□□□ 0.18
SEC13-218ENST00000490283 DLX3O60479 287 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 GLRA3O75311 464 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 OR4F21O95013 312 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 PDYNP01213 254 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 SLC35E2P0CK97 266 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 HSD3B1P14060 373 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 KRT15P19012 456 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 IMPDH1P20839 514 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 HSD3B2P26439 372 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 GALNSP34059 522 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 DEKP35659 375 aaKnown RBP16.17■□□□□ 0.18
SEC13-218ENST00000490283 RFC3P40938 356 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 ASPHQ12797 758 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 NDUFAF5Q5TEU4 345 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 GK5Q6ZS86 529 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 COMMD6Q7Z4G1 85 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 CDYL2Q8N8U2 506 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 ZFP62Q8NB50 900 aaPredicted RBP16.17■□□□□ 0.18
SEC13-218ENST00000490283 GOLM1Q8NBJ4 401 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 OR4K14Q8NGD5 310 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 TMEM237Q96Q45 408 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 GAL3ST4Q96RP7 486 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 ZNF382Q96SR6 550 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 L2HGDHQ9H9P8 463 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 SACM1LQ9NTJ5 587 aa16.17■□□□□ 0.18
SEC13-218ENST00000490283 TEX10Q9NXF1 929 aaPredicted RBP16.17■□□□□ 0.18
SEC13-218ENST00000490283 GOLGA6L10A6NI86 522 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 OR6C76A6NM76 312 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 PPP6CO00743 305 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 PRRG2O14669 202 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 CDC40O60508 579 aaKnown RBP eCLIP16.16■□□□□ 0.18
SEC13-218ENST00000490283 IGKV3-11P04433 115 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 P04436 131 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 TNFRSF8P28908 595 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 PRKAA2P54646 552 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 CSTF3Q12996 717 aaKnown RBP16.16■□□□□ 0.18
SEC13-218ENST00000490283 C3AR1Q16581 482 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 UNC50Q53HI1 259 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 PIGGQ5H8A4 983 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 PAOXQ6QHF9 649 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 GALNT12Q8IXK2 581 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 C9orf40Q8IXQ3 194 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 DND1Q8IYX4 353 aaKnown RBP16.16■□□□□ 0.18
SEC13-218ENST00000490283 SLC15A4Q8N697 577 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 LRRN4CLQ8ND94 238 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 C16orf52Q8NHV5 167 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 METTL6Q8TCB7 284 aa16.16■□□□□ 0.18
SEC13-218ENST00000490283 CCDC120Q96HB5 630 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms