RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ZNF683Q8IZ20 524 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 RAET1EQ8TD07 263 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 HAS2Q92819 552 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 C11orf52Q96A22 123 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 ZFYVE19Q96K21 471 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 MTMR9Q96QG7 549 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 CDK5RAP1Q96SZ6 601 aaKnown RBP2.68□□□□□ -1.98
UBXN4-208ENST00000490163 RHBDL2Q9NX52 303 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 VPS54Q9P1Q0 977 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 SLC24A2Q9UI40 661 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 ELF5Q9UKW6 265 aaPredicted RBP2.68□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF490Q9ULM2 529 aaPredicted RBP2.68□□□□□ -1.98
UBXN4-208ENST00000490163 PLCL2Q9UPR0 1127 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 GSTK1Q9Y2Q3 226 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 AP4B1Q9Y6B7 739 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 BZW2Q9Y6E2 419 aaKnown RBP2.68□□□□□ -1.98
UBXN4-208ENST00000490163 SPACA6W5XKT8 324 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 ECM29Q5VYK3 1845 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 ZCWPW2A0A1B0GU75 182 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 LSM1O15116 133 aaKnown RBP2.68□□□□□ -1.98
UBXN4-208ENST00000490163 ARPC3O15145 178 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 CLN5O75503 358 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 CSF2RAP15509 400 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 SRD5A2P31213 254 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 SLC11A1P49279 550 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 CLCN5P51795 746 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 CCNG1P51959 295 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 VSNL1P62760 191 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 DAZAP2Q15038 168 aaPredicted RBP2.68□□□□□ -1.98
UBXN4-208ENST00000490163 RCN1Q15293 331 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 ACCSLQ4AC99 568 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 SLC43A2Q8N370 569 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 KCNH5Q8NCM2 988 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 ERMNQ8TAM6 284 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 XAGE5Q8WWM1 108 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 IRGQQ8WZA9 623 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 PROX1Q92786 737 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 DAZAP1Q96EP5 407 aaKnown RBP2.68□□□□□ -1.98
UBXN4-208ENST00000490163 DHTKD1Q96HY7 919 aaPredicted RBP2.68□□□□□ -1.98
UBXN4-208ENST00000490163 HES6Q96HZ4 224 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 CCDC17Q96LX7 622 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 CCT7Q99832 543 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 MEAF6Q9HAF1 191 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 ROPN1Q9HAT0 212 aaPredicted RBP2.68□□□□□ -1.98
UBXN4-208ENST00000490163 TAS2R14Q9NYV8 317 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 IFNKQ9P0W0 207 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 PPP2R2CQ9Y2T4 447 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 MAP3K2Q9Y2U5 619 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 KIAA0232Q92628 1395 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 LAMA4Q16363 1823 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 WDR17Q8IZU2 1322 aa2.68□□□□□ -1.98
UBXN4-208ENST00000490163 CXorf65A6NEN9 183 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 LRRIQ3A6PVS8 624 aaPredicted RBP2.67□□□□□ -1.98
UBXN4-208ENST00000490163 C17orf105B2RV13 164 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF587BE7ETH6 402 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 XRCC3O43542 346 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 LDB3O75112 727 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ANP32DO95626 131 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ATP6V1G2O95670 118 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 TSPAN12O95859 305 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 PCCBP05166 539 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 STAG3L1P0CL83 205 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 TOP1P11387 765 aaKnown RBP2.67□□□□□ -1.98
UBXN4-208ENST00000490163 HOXA6P31267 233 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 UGT1A3P35503 534 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 SELENOPP49908 381 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 CRYBB1P53674 252 aaPredicted RBP2.67□□□□□ -1.98
UBXN4-208ENST00000490163 LINC00310P59036 64 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 RASGEF1BQ0VAM2 473 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 VGLL4Q14135 290 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF234Q14588 700 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 AGKQ53H12 422 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ARHGEF16Q5VV41 709 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ASPHD2Q6ICH7 369 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 KCTD18Q6PI47 426 aaPredicted RBP2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ANKRD37Q7Z713 158 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 KLHL7Q8IXQ5 586 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 CCDC63Q8NA47 563 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 SMYD1Q8NB12 490 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 SLC25A43Q8WUT9 341 aaPredicted RBP2.67□□□□□ -1.98
UBXN4-208ENST00000490163 Q96MF0 132 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ANKRD27Q96NW4 1050 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 SH3GL1Q99961 368 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 TMEM175Q9BSA9 504 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 DCTN5Q9BTE1 182 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 NUP58Q9BVL2 599 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 CIPCQ9C0C6 399 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 FAM124BQ9H5Z6 455 aaPredicted RBP2.67□□□□□ -1.98
UBXN4-208ENST00000490163 EBF2Q9HAK2 575 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ZDHHC18Q9NUE0 388 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 GGA2Q9UJY4 613 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 BARX2Q9UMQ3 279 aaPredicted RBP2.67□□□□□ -1.98
UBXN4-208ENST00000490163 KLHDC2Q9Y2U9 406 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 GMEB1Q9Y692 573 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 DICER1Q9UPY3 1922 aaKnown RBP2.67□□□□□ -1.98
UBXN4-208ENST00000490163 LINC00473A8K010 186 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 GPR137BO60478 399 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 HSF2BPO75031 334 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 ZNF623O75123 536 aa2.67□□□□□ -1.98
UBXN4-208ENST00000490163 FLOT1O75955 427 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms