RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 AGKQ53H12 422 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ZDHHC20Q5W0Z9 365 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 CBLN3Q6UW01 205 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 PRSS57Q6UWY2 283 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 KDM7AQ6ZMT4 941 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 PAQR9Q6ZVX9 377 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC16A9Q7RTY1 509 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 EFL1Q7Z2Z2 1120 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 C5orf24Q7Z6I8 188 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 TMCO2Q7Z6W1 182 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 TMC8Q8IU68 726 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 UBQLNLQ8IYU4 475 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 RBFAQ8N0V3 343 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 GCNT2Q8N0V5 402 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 THEM5Q8N1Q8 247 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 SPEM1Q8N4L4 309 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 LRRC17Q8N6Y2 441 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 SIDT2Q8NBJ9 832 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 NEXN-AS1Q8NBZ9 246 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 OR52I2Q8NH67 350 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ATP8B4Q8TF62 1192 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 UBTD2Q8WUN7 234 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 DNASE2BQ8WZ79 361 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 DAZLQ92904 295 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 RASD2Q96D21 266 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 NPAS2Q99743 824 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 C19orf43Q9BQ61 176 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 LMF2Q9BU23 707 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 TMEM39BQ9GZU3 492 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 C6orf106Q9H6K1 298 aaPredicted RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ZDHHC6Q9H6R6 413 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 WDR76Q9H967 626 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 FN3KRPQ9HA64 309 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 CYP3A43Q9HB55 503 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 GPR173Q9NS66 373 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 TXNDC16Q9P2K2 825 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 POLKQ9UBT6 870 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 LRWD1Q9UFC0 647 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 B9D1Q9UPM9 204 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 RUVBL2Q9Y230 463 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC4A4Q9Y6R1 1079 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 ARHGEF10O15013 1369 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 CKAP5Q14008 2032 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 RGPD5Q99666 1765 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 TTC21AQ8NDW8 1320 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 RGS12O14924 1447 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 EDC4Q6P2E9 1401 aaKnown RBP2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 NSD3Q9BZ95 1437 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 NRAPQ86VF7 1730 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 PEAK1Q9H792 1746 aa2.91□□□□□ -1.94
DEPDC1-204ENST00000489862 HYKKA2RU49 373 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 FAM149AA5PLN7 773 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 TEX46H3BTG2 121 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 ARHGEF9O43307 516 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 DFNA5O60443 496 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 RAD51DO75771 328 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 S100A9P06702 114 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 PRSS2P07478 247 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 RRASP10301 218 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 SAGP10523 405 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 ODC1P11926 461 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 CPN1P15169 458 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 GNSP15586 552 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 NCK1P16333 377 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 CPN2P22792 545 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 BDKRB2P30411 391 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 ATP5C1P36542 298 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 CAPGP40121 348 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 CDKN1BP46527 198 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 AP3M2P53677 418 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 CSNK2A1P68400 391 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 RPL36AP83881 106 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 CBX1P83916 185 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 DMPKQ09013 629 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 PLA2G7Q13093 441 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 MAD2L1Q13257 205 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 HNRNPDQ14103 355 aaKnown RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 HNF4GQ14541 408 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 NR1D2Q14995 579 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 ACKR1Q16570 336 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 FBXO48Q5FWF7 155 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 SPDYCQ5MJ68 293 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 C10orf120Q5SQS8 335 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 ARMC12Q5T9G4 340 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 TTC23Q5W5X9 447 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 LYSMD4Q5XG99 296 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 LRRC66Q68CR7 880 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 KIF6Q6ZMV9 814 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 LHFPL4Q7Z7J7 247 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 BIVMQ86UB2 503 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 SERINC5Q86VE9 423 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 VSTM4Q8IW00 320 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 SFTPA2Q8IWL1 248 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 MMD2Q8IY49 270 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 MUC20Q8N307 709 aaPredicted RBP2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 SLC43A2Q8N370 569 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 NPEPL1Q8NDH3 523 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 CSNK2A3Q8NEV1 391 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 BPIFCQ8NFQ6 507 aa2.9□□□□□ -1.94
DEPDC1-204ENST00000489862 OR11H4Q8NGC9 324 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms