RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-206	ENST00000489853	BTBD1	Q9H0C5	482 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ANKRD19P	Q9H560	264 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FAM124B	Q9H5Z6	455 aa	Predicted RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CCDC86	Q9H6F5	360 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DDX31	Q9H8H2	851 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	EVA1A	Q9H8M9	152 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	B3GAT2	Q9NPZ5	323 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CLN6	Q9NWW5	311 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TXNL4B	Q9NX01	149 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	IMPAD1	Q9NX62	359 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MED11	Q9P086	117 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MYEF2	Q9P2K5	600 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SEC14L3	Q9UDX4	400 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MIOX	Q9UGB7	285 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TCEAL9	Q9UHQ7	104 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FZD10	Q9ULW2	581 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PPIE	Q9UNP9	301 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PADI2	Q9Y2J8	665 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LSM2	Q9Y333	95 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ZNF451	Q9Y4E5	1061 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NEUROG3	Q9Y4Z2	214 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CFAP20	Q9Y6A4	193 aa	Known RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SCN9A	Q15858	1988 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GREB1L	Q9C091	1923 aa	Predicted RBP	4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	BTAF1	O14981	1849 aa		4.55	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TEX13C	A0A0J9YWL9	993 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LOC285095	A0A1B0GVY8	99 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TCRBV16S1A1N1	A0A5B0	115 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ANKDD1B	A6NHY2	528 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	LACTBL1	A8MY62	500 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CHURC1-FNTB	B4DL54	471 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	AGRP	O00253	132 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	WNT9A	O14904	365 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SCAMP1	O15126	338 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TPST2	O60704	377 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SDC3	O75056	442 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MLYCD	O95822	493 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ESR1	P03372	595 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HRG	P04196	525 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SEMG1	P04279	462 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PFKM	P08237	780 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HAPLN1	P10915	354 aa	Predicted RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ANXA8	P13928	327 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NME1	P15531	152 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CD1D	P15813	335 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	UGT2B7	P16662	529 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	HOXB8	P17481	243 aa	Predicted RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PVALB	P20472	110 aa	Predicted RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	OGN	P20774	298 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ACADL	P28330	430 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	EIF2S3	P41091	472 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CRKL	P46109	303 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	STK19	P49842	368 aa	Predicted RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ARFIP1	P53367	373 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NUDT6	P53370	316 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ERVK-25	P63136	954 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DEFA5	Q01523	94 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DSC2	Q02487	901 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MTMR1	Q13613	665 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	IL18	Q14116	193 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SPHAR	Q15513	63 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	CHRNA6	Q15825	494 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MAPKAPK3	Q16644	382 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MFSD14B	Q5SR56	506 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MEDAG	Q5VYS4	303 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	APOBEC3H	Q6NTF7	200 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	FGD2	Q7Z6J4	655 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ABI3BP	Q7Z7G0	1075 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MSRB3	Q8IXL7	192 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PYROXD2	Q8N2H3	581 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KLHL36	Q8N4N3	616 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	C12orf29	Q8N999	325 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	COQ8A	Q8NI60	647 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	WDR20	Q8TBZ3	569 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	ADAMTS14	Q8WXS8	1223 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NANOS1	Q8WY41	292 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KCNJ9	Q92806	393 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	C12orf42	Q96LP6	360 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	KCTD7	Q96MP8	289 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	MYOC	Q99972	504 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	YIPF4	Q9BSR8	244 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SPATA5L1	Q9BVQ7	753 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	GSDMC	Q9BYG8	508 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DPAGT1	Q9H3H5	408 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NXF3	Q9H4D5	531 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TFB2M	Q9H5Q4	396 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SEBOX	Q9HB31	216 aa	Predicted RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PDGFC	Q9NRA1	345 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	RAD18	Q9NS91	495 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	TREX1	Q9NSU2	369 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	THUMPD1	Q9NXG2	353 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	NDUFAF4	Q9P032	175 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	DUSP12	Q9UNI6	340 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	SLC45A1	Q9Y2W3	748 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	AAR2	Q9Y312	384 aa	Known RBP	4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PCDHGA2	Q9Y5H1	932 aa		4.54	□□□□□ -1.68
SNRNP40-206	ENST00000489853	PCDHA10	Q9Y5I2	948 aa		4.54	□□□□□ -1.68

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