RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 ARIH2OSQ8N7S6 290 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF611Q8N823 705 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 OR14A16Q8NHC5 309 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 DAZLQ92904 295 aaKnown RBP8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ABTB1Q969K4 478 aaPredicted RBP8.34□□□□□ -1.07
SSBP1-212ENST00000489378 HSH2DQ96JZ2 352 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ZNF597Q96LX8 424 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ZFP3Q96NJ6 502 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 FAM111AQ96PZ2 611 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 TM9SF2Q99805 663 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ANP32EQ9BTT0 268 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 SLCO5A1Q9H2Y9 848 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 UBQLN3Q9H347 655 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 CNIH4Q9P003 139 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 ZFP69BQ9UJL9 534 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 LAMP3Q9UQV4 416 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 EFR3BQ9Y2G0 817 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 MED16Q9Y2X0 877 aa8.34□□□□□ -1.07
SSBP1-212ENST00000489378 A0A096LNT2 108 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.33□□□□□ -1.08
SSBP1-212ENST00000489378 A0A1W2PNV4 684 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 C17orf105B2RV13 164 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 E5RI56 91 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 OVOL3O00110 214 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 HS3ST1O14792 307 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 SMNDC1O75940 238 aaKnown RBP eCLIP8.33□□□□□ -1.08
SSBP1-212ENST00000489378 ETHE1O95571 254 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 EGR1P18146 543 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 NAGLUP54802 743 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
SSBP1-212ENST00000489378 RPS4XP62701 263 aaKnown RBP8.33□□□□□ -1.08
SSBP1-212ENST00000489378 FNDC7Q5VTL7 733 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 ANKRD34AQ69YU3 496 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 BICRALQ6AI39 1079 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 DNAJC14Q6Y2X3 702 aaPredicted RBP8.33□□□□□ -1.08
SSBP1-212ENST00000489378 CLEC17AQ6ZS10 378 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 ADGRE4PQ86SQ3 457 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 C9orf40Q8IXQ3 194 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 GPATCH11Q8N954 259 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 ANKRD53Q8N9V6 530 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 GABPB2Q8TAK5 448 aaPredicted RBP8.33□□□□□ -1.08
SSBP1-212ENST00000489378 ZNF721Q8TF20 911 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 ART5Q96L15 291 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 RUNDC3BQ96NL0 473 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 GNRHR2Q96P88 292 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 OR4K3Q96R72 315 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 CSF3RQ99062 836 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 G6PC3Q9BUM1 346 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 ALOXE3Q9BYJ1 711 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 ADAM19Q9H013 955 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 OPN3Q9H1Y3 402 aaPredicted RBP8.33□□□□□ -1.08
SSBP1-212ENST00000489378 EIF2B3Q9NR50 452 aaKnown RBP8.33□□□□□ -1.08
SSBP1-212ENST00000489378 TMEM160Q9NX00 188 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 VTI1BQ9UEU0 232 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 ADAMTS6Q9UKP5 1117 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 PDE10AQ9Y233 779 aa8.33□□□□□ -1.08
SSBP1-212ENST00000489378 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.33□□□□□ -1.08
SSBP1-212ENST00000489378 PRKDCP78527 4128 aaKnown RBP8.32□□□□□ -1.08
SSBP1-212ENST00000489378 LRRC14BA6NHZ5 514 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 ERI2A8K979 691 aaKnown RBP8.32□□□□□ -1.08
SSBP1-212ENST00000489378 H0Y3Z8 333 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 KLF4O43474 513 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 NDUFS7O75251 213 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 VAPBO95292 243 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 THBDP07204 575 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 TNNI3P19429 210 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 PTPN7P35236 360 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 RPL22P35268 128 aaKnown RBP8.32□□□□□ -1.08
SSBP1-212ENST00000489378 AHRP35869 848 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 CDKN1AP38936 164 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 PCYT1AP49585 367 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 RAB38P57729 211 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 SRYQ05066 204 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 TBL3Q12788 808 aaKnown RBP8.32□□□□□ -1.08
SSBP1-212ENST00000489378 IQCB1Q15051 598 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 TOMM20Q15388 145 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 TMEM249Q2WGJ8 235 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 TTLL9Q3SXZ7 439 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 BBS9Q3SYG4 887 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 PCID2Q5JVF3 399 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 VWA1Q6PCB0 445 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 CES3Q6UWW8 571 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 SH2D5Q6ZV89 423 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 IL17RELQ6ZVW7 336 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 SDCCAG8Q86SQ7 713 aaPredicted RBP8.32□□□□□ -1.08
SSBP1-212ENST00000489378 CAND1Q86VP6 1230 aaKnown RBP8.32□□□□□ -1.08
SSBP1-212ENST00000489378 ZNF595Q8IYB9 648 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 PYCR2Q96C36 320 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 STARD4Q96DR4 205 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 SNF8Q96H20 258 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 CHP1Q99653 195 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 SHARPINQ9H0F6 387 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 BRD7Q9NPI1 651 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 CLCF1Q9UBD9 225 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 LPAR3Q9UBY5 353 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 AMFRQ9UKV5 643 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 DTX4Q9Y2E6 619 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 C15orf41Q9Y2V0 281 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 PCDHA13Q9Y5I0 950 aa8.32□□□□□ -1.08
SSBP1-212ENST00000489378 URADA6NGE7 173 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 199.8 ms