RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ZNF24P17028 368 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 ATP5F1P24539 256 aaPredicted RBP23.17■■□□□ 1.3
HMGN1-217ENST00000489072 BIKQ13323 160 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 KRTCAP3Q53RY4 240 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 IL20RBQ6UXL0 311 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 ST13P4Q8IZP2 240 aaPredicted RBP23.17■■□□□ 1.3
HMGN1-217ENST00000489072 METTL4Q8N3J2 472 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 ASB15Q8WXK1 588 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 HPF1Q9NWY4 346 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 COPS7AQ9UBW8 275 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 TRPS1Q9UHF7 1281 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 ERVK-11Q9UQG0 969 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 NOTCH2Q04721 2471 aa23.17■■□□□ 1.3
HMGN1-217ENST00000489072 SLC19A2O60779 497 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 SUPT7LO94864 414 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 GSTA1P08263 222 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 COL8A1P27658 744 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 TNFRSF8P28908 595 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 RFC3P40938 356 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 CA7P43166 264 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 GPR85P60893 370 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 RBPJQ06330 500 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 TCHHL1Q5QJ38 904 aaPredicted RBP23.16■■□□□ 1.3
HMGN1-217ENST00000489072 C9orf40Q8IXQ3 194 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 GPALPP1Q8IXQ4 340 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 UBLCP1Q8WVY7 318 aaPredicted RBP23.16■■□□□ 1.3
HMGN1-217ENST00000489072 SELENOMQ8WWX9 145 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 FBXL20Q96IG2 436 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 WDR41Q9HAD4 459 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 TIMMDC1Q9NPL8 285 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 DEPPQ9NTK1 212 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 SH3BGRL2Q9UJC5 107 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 ADAM29Q9UKF5 820 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 EMCNQ9ULC0 261 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 SNX6Q9UNH7 406 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 SLC12A4Q9UP95 1085 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 ITPR2Q14571 2701 aa23.16■■□□□ 1.3
HMGN1-217ENST00000489072 ZNF407Q9C0G0 2248 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 ZNHIT1O43257 154 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 ASNA1O43681 348 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 MLYCDO95822 493 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 IMPDH1P20839 514 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 PRKAA2P54646 552 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 HSF1Q00613 529 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 GALNT1Q10472 559 aaPredicted RBP23.15■■□□□ 1.3
HMGN1-217ENST00000489072 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.15■■□□□ 1.3
HMGN1-217ENST00000489072 OR52E8Q6IFG1 317 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 SH2D5Q6ZV89 423 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 COMMD6Q7Z4G1 85 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 CHERPQ8IWX8 916 aaKnown RBP23.15■■□□□ 1.3
HMGN1-217ENST00000489072 CDYL2Q8N8U2 506 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 POGLUT1Q8NBL1 392 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 PSD4Q8NDX1 1056 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 OR5L2Q8NGL0 311 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 ZNF382Q96SR6 550 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 HBEGFQ99075 208 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 AHSPQ9NZD4 102 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 ZNF835Q9Y2P0 537 aa23.15■■□□□ 1.3
HMGN1-217ENST00000489072 ARHGAP10A1A4S6 786 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 KLRC4-KLRK1H3BQV0 150 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 SLCO1A2P46721 670 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 ERVK-8P63133 956 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 TBL3Q12788 808 aaKnown RBP23.14■■□□□ 1.29
HMGN1-217ENST00000489072 C3AR1Q16581 482 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 SPRED3Q2MJR0 410 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 CCNYL2Q5T2Q4 361 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 PAGE2Q7Z2X7 111 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 ZFP62Q8NB50 900 aaPredicted RBP23.14■■□□□ 1.29
HMGN1-217ENST00000489072 L3HYPDHQ96EM0 354 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 PELOQ9BRX2 385 aaKnown RBP23.14■■□□□ 1.29
HMGN1-217ENST00000489072 CNPPD1Q9BV87 410 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 BRF2Q9HAW0 419 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 ERVK-19Q9WJR5 959 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 TEX15Q9BXT5 2789 aa23.14■■□□□ 1.29
HMGN1-217ENST00000489072 A0A0G2JMM0 328 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 A0A1W2PPB8 328 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 A0A1W2PRS3 328 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 PINLYPA6NC86 204 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 KIR3DP1A8MWS1 328 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 MANBAO00462 879 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 CCL21O00585 134 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 DYRK3O43781 588 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 OR10H2O60403 315 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 SLC35E2P0CK97 266 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 ASPHQ12797 758 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 ZNF267Q14586 743 aaPredicted RBP23.13■■□□□ 1.29
HMGN1-217ENST00000489072 RASA2Q15283 850 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 ZNF750Q32MQ0 723 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 PIGGQ5H8A4 983 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 NDUFAF5Q5TEU4 345 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 GPRIN3Q6ZVF9 776 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 SLC22A9Q8IVM8 553 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 NUBPLQ8TB37 319 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 RIT1Q92963 219 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 MAGED4Q96JG8 741 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 ART5Q96L15 291 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 ANKZF1Q9H8Y5 726 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 DCDC2Q9UHG0 476 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 TINAGQ9UJW2 476 aa23.13■■□□□ 1.29
HMGN1-217ENST00000489072 DNAJC13O75165 2243 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms