RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 GNG14A0A1W2PPG7 69 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 CAPN14A8MX76 684 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 TGFBR3LH3BV60 316 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 PROM1O43490 865 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 AIFM1O95831 613 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 LDLRP01130 860 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 STSP08842 583 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 HSD3B1P14060 373 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 NT5EP21589 574 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 HSD3B2P26439 372 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 BSGP35613 385 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 RFC3P40938 356 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 SOX3P41225 446 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 SMSP52788 366 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 HNRNPH2P55795 449 aaKnown RBP8.48□□□□□ -1.05
HDAC6-232ENST00000489053 NRG3P56975 720 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 GPR85P60893 370 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 NAA20P61599 178 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 SRSF1Q07955 248 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDAC6-232ENST00000489053 LCP2Q13094 533 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 CCDC153Q494R4 210 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 ZNF468Q5VIY5 522 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-232ENST00000489053 ZNF324BQ6AW86 544 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-232ENST00000489053 GK5Q6ZS86 529 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 FAM47EQ6ZV65 393 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 SLC22A16Q86VW1 577 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 CPSF7Q8N684 471 aaKnown RBP8.48□□□□□ -1.05
HDAC6-232ENST00000489053 PSD4Q8NDX1 1056 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 FAM13CQ8NE31 585 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 MYRIPQ8NFW9 859 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 OR4K14Q8NGD5 310 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 ANKRD9Q96BM1 317 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-232ENST00000489053 SENP5Q96HI0 755 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-232ENST00000489053 FBXL20Q96IG2 436 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 FRMD6Q96NE9 622 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 RASL10BQ96S79 203 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 MRPL1Q9BYD6 325 aaKnown RBP8.48□□□□□ -1.05
HDAC6-232ENST00000489053 RUBCNLQ9H714 662 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 EXO5Q9H790 373 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 LIN28AQ9H9Z2 209 aaKnown RBP8.48□□□□□ -1.05
HDAC6-232ENST00000489053 BRF2Q9HAW0 419 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 SACM1LQ9NTJ5 587 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 TMEM216Q9P0N5 145 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 SENP1Q9P0U3 644 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 VPS29Q9UBQ0 182 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 TRPS1Q9UHF7 1281 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 ADAM29Q9UKF5 820 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 PPT2Q9UMR5 302 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 ZNF780BQ9Y6R6 833 aa8.48□□□□□ -1.05
HDAC6-232ENST00000489053 POLEQ07864 2286 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 DOCK10Q96BY6 2186 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 A0A0A6YYD5 115 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 A0A1W2PR48 441 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 TLDC2A0PJX2 215 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ASPDHA6ND91 283 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 OR6C76A6NM76 312 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 MANBAO00462 879 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ASNA1O43681 348 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 TMPRSS11DO60235 418 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ZG16O60844 167 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 CDH16O75309 829 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 PRKRAO75569 313 aaKnown RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ERAL1O75616 437 aaKnown RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 OR6B1O95007 311 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 OR4F21O95013 312 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ETHE1O95571 254 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 PDYNP01213 254 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ENO1P06733 434 aaKnown RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 SLC35E2P0CK97 266 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 MST1P26927 711 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 SERPINB3P29508 390 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 HSD17B3P37058 310 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 TMED10P49755 219 aaKnown RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 XKP51811 444 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 TDGF1P3P51864 188 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 HK2P52789 917 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 PKNOX1P55347 436 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ERVK-8P63133 956 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 KCNJ2P63252 427 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 RPP38P78345 283 aaKnown RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ACSM2AQ08AH3 577 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 TBL3Q12788 808 aaKnown RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ASPHQ12797 758 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 CSTF3Q12996 717 aaKnown RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 SPDYAQ5MJ70 313 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ZNF678Q5SXM1 525 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 NDUFAF5Q5TEU4 345 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 ACSM2BQ68CK6 577 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 LETMD1Q6P1Q0 360 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 RPTNQ6XPR3 784 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 C16orf47Q6ZP98 133 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 RGS9BPQ6ZS82 235 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 RPS27LQ71UM5 84 aaKnown RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 COMMD6Q7Z4G1 85 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 SULF2Q8IWU5 870 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 DND1Q8IYX4 353 aaKnown RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 GBP7Q8N8V2 638 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-232ENST00000489053 CDC26Q8NHZ8 85 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 KLHL29Q96CT2 875 aa8.47□□□□□ -1.05
HDAC6-232ENST00000489053 SGCZQ96LD1 299 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms