RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 DCAKDQ8WVC6 231 aa11.05□□□□□ -0.64
CCHCR1-215ENST00000488920 ISL2Q96A47 359 aa11.05□□□□□ -0.64
CCHCR1-215ENST00000488920 CHST11Q9NPF2 352 aa11.05□□□□□ -0.64
CCHCR1-215ENST00000488920 PSD3Q9NYI0 1048 aa11.05□□□□□ -0.64
CCHCR1-215ENST00000488920 XPR1Q9UBH6 696 aa11.05□□□□□ -0.64
CCHCR1-215ENST00000488920 PCTPQ9UKL6 214 aa11.05□□□□□ -0.64
CCHCR1-215ENST00000488920 PPT2Q9UMR5 302 aa11.05□□□□□ -0.64
CCHCR1-215ENST00000488920 A0A087WUV0 522 aaPredicted RBP11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 E9PLN8 166 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 STX16-NPEPL1H3BU86 382 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 STX16O14662 325 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 PGRMC2O15173 223 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 OR10H2O60403 315 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 IGKV3-11P04433 115 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 TPOP07202 933 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 NR2F6P10588 404 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 COL6A2P12110 1019 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 AGAP20933 346 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 ARFIP1P53367 373 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 HERVK_113P63132 956 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 ERVK-8P63133 956 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 PLIN5Q00G26 463 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 BIKQ13323 160 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 ZNF267Q14586 743 aaPredicted RBP11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 MPEG1Q2M385 716 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 TSNAXIP1Q2TAA8 658 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 CD163Q86VB7 1156 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 RIT1Q92963 219 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 FBXL20Q96IG2 436 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 SGCZQ96LD1 299 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 DMRTA2Q96SC8 542 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 SERPINI1Q99574 410 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 VKORC1Q9BQB6 163 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 FAM173AQ9BQD7 235 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 NTMT1Q9BV86 223 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 CNPPD1Q9BV87 410 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 ERVK-6Q9BXR3 956 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 RUBCNLQ9H714 662 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 ZBTB26Q9HCK0 441 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 SEMA4BQ9NPR2 832 aaPredicted RBP11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 LYARQ9NX58 379 aaKnown RBP11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 TMCO1Q9UM00 188 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 ERVK-19Q9WJR5 959 aa11.04□□□□□ -0.64
CCHCR1-215ENST00000488920 IQANK1A0A1B0GTG1 560 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 A0A1B0GTL3 188 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 A0A1W2PS29 197 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 C19orf84I3L1E1 186 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 PPP6CO00743 305 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 GLSO94925 669 aaPredicted RBP11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 CLDN14O95500 239 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 AIFM1O95831 613 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 P04436 131 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 KLK1P06870 262 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 SNRPAP09012 282 aaKnown RBP11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 CCL3P10147 92 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 COX6B1P14854 86 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 TSPAN8P19075 237 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 CNTFP26441 200 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 PIGAP37287 484 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 DNASE1L1P49184 302 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 CDH13P55290 713 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 TRAF3Q13114 568 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 ZNF791Q3KP31 576 aaPredicted RBP11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 TEX35Q5T0J7 233 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 FRG2Q64ET8 278 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 ARHGAP11AQ6P4F7 1023 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 GK5Q6ZS86 529 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 FAM47EQ6ZV65 393 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 MILR1Q7Z6M3 343 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 NUDT13Q86X67 352 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 ST13P4Q8IZP2 240 aaPredicted RBP11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 TMEM151AQ8N4L1 468 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 GOLM1Q8NBJ4 401 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 OR4F6Q8NGB9 312 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 NUBPLQ8TB37 319 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 ART5Q96L15 291 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 FRG2BQ96QU4 278 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 GAL3ST4Q96RP7 486 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 MRPL57Q9BQC6 102 aaKnown RBP11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 TTTY12Q9BZ98 90 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 MRPL46Q9H2W6 279 aaKnown RBP11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 WDR41Q9HAD4 459 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 FARSBQ9NSD9 589 aaKnown RBP11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 SACM1LQ9NTJ5 587 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 ZNF180Q9UJW8 692 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 NFU1Q9UMS0 254 aa11.03□□□□□ -0.64
CCHCR1-215ENST00000488920 EXOC1LA0A1B0GW35 172 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 NPIPA2E9PIF3 369 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 NPIPA3F8WFD2 350 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 ACOT7O00154 380 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SEMA3DO95025 777 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 NADKO95544 446 aaPredicted RBP11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SBK3P0C264 359 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC35E2P0CK97 266 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 TNFRSF8P28908 595 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 MAGEA5P43359 124 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 KIR3DL1P43629 444 aa11.02□□□□□ -0.65
CCHCR1-215ENST00000488920 SLC37A1P57057 533 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms