RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 HSPA4LO95757 839 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 IGKV3-11P04433 115 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 JUNP05412 331 aaKnown RBP17.39■□□□□ 0.37
PTCD3-217ENST00000488801 IL3P08700 152 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 LINC00032P0C843 101 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 ALOX15P16050 662 aaPredicted RBP17.39■□□□□ 0.37
PTCD3-217ENST00000488801 TAS2R50P59544 299 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 PLIN5Q00G26 463 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 NFATC3Q12968 1075 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 CEBPEQ15744 281 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 IRAK1BP1Q5VVH5 260 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 B3GNTL1Q67FW5 361 aaPredicted RBP17.39■□□□□ 0.37
PTCD3-217ENST00000488801 NOXRED1Q6NXP6 359 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 SIRT6Q8N6T7 355 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 MORN4Q8NDC4 146 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 AGR3Q8TD06 166 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 MGARPQ8TDB4 240 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 DAZLQ92904 295 aaKnown RBP17.39■□□□□ 0.37
PTCD3-217ENST00000488801 NCLNQ969V3 563 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 VMP1Q96GC9 406 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 C3orf30Q96M34 536 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 CCT7Q99832 543 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 PELOQ9BRX2 385 aaKnown RBP17.39■□□□□ 0.37
PTCD3-217ENST00000488801 LRTM1Q9HBL6 345 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 EXO1Q9UQ84 846 aaKnown RBP17.39■□□□□ 0.37
PTCD3-217ENST00000488801 DLGAP4Q9Y2H0 992 aa17.39■□□□□ 0.37
PTCD3-217ENST00000488801 UQCRHLA0A096LP55 91 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 MYOCOSA0A1B0GUC4 107 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 KLF11O14901 512 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 SORBS2O94875 1100 aaKnown RBP17.38■□□□□ 0.37
PTCD3-217ENST00000488801 UQCRHP07919 91 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 ANXA4P09525 319 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-217ENST00000488801 SLC35E2P0CK97 266 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 DRD2P14416 443 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 OCRLQ01968 901 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 BTKQ06187 659 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 KLRB1Q12918 225 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 STX3Q13277 289 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 NR6A1Q15406 480 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 SPDYAQ5MJ70 313 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 FAM71E1Q6IPT2 247 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 KIRREL3Q8IZU9 778 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 OR1N1Q8NGS0 311 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 ZNF721Q8TF20 911 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 ZNF764Q96H86 408 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-217ENST00000488801 ZNF681Q96N22 645 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 FAIM2Q9BWQ8 316 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 KCNK13Q9HB14 408 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 EHD3Q9NZN3 535 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 PTGFRNQ9P2B2 879 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 ANAPC2Q9UJX6 822 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 WBP11Q9Y2W2 641 aaKnown RBP17.38■□□□□ 0.37
PTCD3-217ENST00000488801 TMED5Q9Y3A6 229 aa17.38■□□□□ 0.37
PTCD3-217ENST00000488801 POLR3HQ9Y535 204 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-217ENST00000488801 RP1L1Q8IWN7 2480 aaPredicted RBP17.38■□□□□ 0.37
PTCD3-217ENST00000488801 FASNP49327 2511 aaKnown RBP17.38■□□□□ 0.37
PTCD3-217ENST00000488801 GNG14A0A1W2PPG7 69 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 C17orf105B2RV13 164 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 MAN1A2O60476 641 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 SKAP2O75563 359 aaPredicted RBP17.37■□□□□ 0.37
PTCD3-217ENST00000488801 CLPSP04118 112 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 CPMP14384 443 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 SDC1P18827 310 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 TACR1P25103 407 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 PIK3R1P27986 724 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 SOX18P35713 384 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 RPL14P50914 215 aaKnown RBP17.37■□□□□ 0.37
PTCD3-217ENST00000488801 CLCN2P51788 898 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 DUSP2Q05923 314 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 RFTN2Q52LD8 501 aaPredicted RBP17.37■□□□□ 0.37
PTCD3-217ENST00000488801 Q6ZS92 163 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 IKBIPQ70UQ0 350 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 CRLF3Q8IUI8 442 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 DDIASQ8IXT1 998 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 Q8NA96 180 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 OR4K14Q8NGD5 310 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 SLC2A12Q8TD20 617 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 C19orf60Q96EN9 201 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 CNRIP1Q96F85 164 aaPredicted RBP17.37■□□□□ 0.37
PTCD3-217ENST00000488801 FBXL20Q96IG2 436 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 DGAT2Q96PD7 388 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 PAIP2Q9BPZ3 127 aaKnown RBP17.37■□□□□ 0.37
PTCD3-217ENST00000488801 ILKAPQ9H0C8 392 aaPredicted RBP17.37■□□□□ 0.37
PTCD3-217ENST00000488801 THAP1Q9NVV9 213 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 CSAG2Q9Y5P2 127 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 CLCA3PQ9Y6N3 262 aa17.37■□□□□ 0.37
PTCD3-217ENST00000488801 NINQ8N4C6 2090 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 HELZ2Q9BYK8 2649 aaKnown RBP17.36■□□□□ 0.37
PTCD3-217ENST00000488801 TMEM200CA6NKL6 621 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 B8ZZF3 427 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 PRKNO60260 465 aaPredicted RBP17.36■□□□□ 0.37
PTCD3-217ENST00000488801 SEC22BO75396 215 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 IFNA16P05015 189 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 ATP1B1P05026 303 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 COX7A2P14406 83 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 DDCP20711 480 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 HK2P52789 917 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 RPL38P63173 70 aaKnown RBP17.36■□□□□ 0.37
PTCD3-217ENST00000488801 NADK2Q4G0N4 442 aa17.36■□□□□ 0.37
PTCD3-217ENST00000488801 SLC6A19Q695T7 634 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms