RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 TMEM178AQ8NBL3 297 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 FAM98AQ8NCA5 519 aaKnown RBP12.02□□□□□ -0.49
PHF1-210ENST00000488767 APCDD1LQ8NCL9 501 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 OR6Y1Q8NGX8 325 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 OR8K3Q8NH51 312 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 SLC2A12Q8TD20 617 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 PTPMT1Q8WUK0 201 aaPredicted RBP12.02□□□□□ -0.49
PHF1-210ENST00000488767 CHTF18Q8WVB6 975 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 RIT1Q92963 219 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 TMEM125Q96AQ2 219 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 METTL2AQ96IZ6 378 aaKnown RBP12.02□□□□□ -0.49
PHF1-210ENST00000488767 MECRQ9BV79 373 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 CNPPD1Q9BV87 410 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 GIMAP4Q9NUV9 329 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 TEX10Q9NXF1 929 aaPredicted RBP12.02□□□□□ -0.49
PHF1-210ENST00000488767 FIS1Q9Y3D6 152 aa12.02□□□□□ -0.49
PHF1-210ENST00000488767 FASNP49327 2511 aaKnown RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 MYOCOSA0A1B0GUC4 107 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 NPIPB8E9PQR5 432 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 BIRC5O15392 142 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 ERAL1O75616 437 aaKnown RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 RSL1D1O76021 490 aaKnown RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 FGF4P08620 206 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 ANXA4P09525 319 aaPredicted RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 DRD2P14416 443 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 PORP16435 677 aaPredicted RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 TIA1P31483 386 aaKnown RBP eCLIP12.01□□□□□ -0.49
PHF1-210ENST00000488767 GALNSP34059 522 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 SERPINB4P48594 390 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 FOXA1P55317 472 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 MLF1P58340 268 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 FOXK1P85037 733 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 KCNC4Q03721 635 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 TUBA3CQ13748 450 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 ELOAQ14241 798 aaKnown RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 CASP8Q14790 479 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 OR1C1Q15619 314 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 ARL13AQ5H913 290 aaPredicted RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 HHATQ5VTY9 493 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 CLEC6AQ6EIG7 209 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 RPUSD3Q6P087 351 aaKnown RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 TUBA3EQ6PEY2 450 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 SCIMPQ6UWF3 145 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 SLC29A4Q7RTT9 530 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 TRIM46Q7Z4K8 759 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 DDIASQ8IXT1 998 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 KIRREL3Q8IZU9 778 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 GOLGA6L1Q8N7Z2 621 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 BCORP1Q8N888 145 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 Q8NA96 180 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 CATSPER1Q8NEC5 780 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 FAM76AQ8TAV0 307 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 THAP3Q8WTV1 239 aaPredicted RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 KLHL29Q96CT2 875 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 SENP5Q96HI0 755 aaPredicted RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 FBXL20Q96IG2 436 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 SIRT5Q9NXA8 310 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 LRFN1Q9P244 771 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 YARS2Q9Y2Z4 477 aaKnown RBP12.01□□□□□ -0.49
PHF1-210ENST00000488767 PCDHA9Q9Y5H5 950 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 CLDN16Q9Y5I7 305 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 CSAG2Q9Y5P2 127 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 BSNQ9UPA5 3926 aa12.01□□□□□ -0.49
PHF1-210ENST00000488767 MYO18BQ8IUG5 2567 aa12□□□□□ -0.49
PHF1-210ENST00000488767 HELZ2Q9BYK8 2649 aaKnown RBP12□□□□□ -0.49
PHF1-210ENST00000488767 PGRMC2O15173 223 aa12□□□□□ -0.49
PHF1-210ENST00000488767 SEC22BO75396 215 aa12□□□□□ -0.49
PHF1-210ENST00000488767 ITGA10O75578 1167 aa12□□□□□ -0.49
PHF1-210ENST00000488767 RASAL1O95294 804 aa12□□□□□ -0.49
PHF1-210ENST00000488767 HSPA4LO95757 839 aa12□□□□□ -0.49
PHF1-210ENST00000488767 CRYABP02511 175 aaKnown RBP12□□□□□ -0.49
PHF1-210ENST00000488767 DHRS4L1P0CG22 281 aa12□□□□□ -0.49
PHF1-210ENST00000488767 CHN1P15882 459 aa12□□□□□ -0.49
PHF1-210ENST00000488767 H2AFXP16104 143 aaPredicted RBP12□□□□□ -0.49
PHF1-210ENST00000488767 CREB1P16220 341 aa12□□□□□ -0.49
PHF1-210ENST00000488767 CSNK2A2P19784 350 aaPredicted RBP12□□□□□ -0.49
PHF1-210ENST00000488767 SERPINB3P29508 390 aa12□□□□□ -0.49
PHF1-210ENST00000488767 SSR4P51571 173 aa12□□□□□ -0.49
PHF1-210ENST00000488767 XKP51811 444 aa12□□□□□ -0.49
PHF1-210ENST00000488767 ZNF763Q0D2J5 394 aa12□□□□□ -0.49
PHF1-210ENST00000488767 ZNF267Q14586 743 aaPredicted RBP12□□□□□ -0.49
PHF1-210ENST00000488767 NR6A1Q15406 480 aa12□□□□□ -0.49
PHF1-210ENST00000488767 SPRED3Q2MJR0 410 aa12□□□□□ -0.49
PHF1-210ENST00000488767 ZNF766Q5HY98 468 aa12□□□□□ -0.49
PHF1-210ENST00000488767 SH2D4BQ5SQS7 431 aa12□□□□□ -0.49
PHF1-210ENST00000488767 SLC48A1Q6P1K1 146 aa12□□□□□ -0.49
PHF1-210ENST00000488767 GALNT18Q6P9A2 607 aa12□□□□□ -0.49
PHF1-210ENST00000488767 RNF111Q6ZNA4 994 aa12□□□□□ -0.49
PHF1-210ENST00000488767 GALNT12Q8IXK2 581 aa12□□□□□ -0.49
PHF1-210ENST00000488767 GPALPP1Q8IXQ4 340 aa12□□□□□ -0.49
PHF1-210ENST00000488767 CLYBLQ8N0X4 340 aa12□□□□□ -0.49
PHF1-210ENST00000488767 GALNT11Q8NCW6 608 aa12□□□□□ -0.49
PHF1-210ENST00000488767 CDC26Q8NHZ8 85 aa12□□□□□ -0.49
PHF1-210ENST00000488767 ASB15Q8WXK1 588 aa12□□□□□ -0.49
PHF1-210ENST00000488767 MIB2Q96AX9 1013 aa12□□□□□ -0.49
PHF1-210ENST00000488767 PPWD1Q96BP3 646 aaKnown RBP12□□□□□ -0.49
PHF1-210ENST00000488767 SNRNP40Q96DI7 357 aaKnown RBP12□□□□□ -0.49
PHF1-210ENST00000488767 CCT7Q99832 543 aa12□□□□□ -0.49
PHF1-210ENST00000488767 PAIP2Q9BPZ3 127 aaKnown RBP12□□□□□ -0.49
PHF1-210ENST00000488767 EBPLQ9BY08 206 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms