RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 AKAP10O43572 662 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 RAD1O60671 282 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 SMIM18P0DKX4 95 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 ATXN8OSP0DMR3 200 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 ALOX12P18054 663 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 OR1D4P47884 311 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 TXNL4AP83876 142 aaKnown RBP18.27■□□□□ 0.52
CCM2-216ENST00000488727 ABHD18Q0P651 414 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 MAP7Q14244 749 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 C6orf52Q5T4I8 152 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 C10orf62Q5T681 223 aaPredicted RBP18.27■□□□□ 0.52
CCM2-216ENST00000488727 KHDRBS2Q5VWX1 349 aaKnown RBP18.27■□□□□ 0.52
CCM2-216ENST00000488727 UNQ6494/PRO21346Q6UXR6 183 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 UBE3DQ7Z6J8 389 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 AMIGO2Q86SJ2 522 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 NLGN4XQ8N0W4 816 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 NLGN4YQ8NFZ3 816 aaPredicted RBP18.27■□□□□ 0.52
CCM2-216ENST00000488727 OR2L5Q8NG80 312 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 GAL3ST3Q96A11 431 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 PPWD1Q96BP3 646 aaKnown RBP18.27■□□□□ 0.52
CCM2-216ENST00000488727 CENPKQ9BS16 269 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 PRM3Q9NNZ6 103 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 LHX9Q9NQ69 397 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 SLC22A11Q9NSA0 550 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 MAGEL2Q9UJ55 1249 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 PPT2Q9UMR5 302 aa18.27■□□□□ 0.52
CCM2-216ENST00000488727 A0A0G2JN53 185 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 URADA6NGE7 173 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 SAP18O00422 153 aaKnown RBP18.26■□□□□ 0.51
CCM2-216ENST00000488727 TNFAIP8O95379 198 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 IL6P05231 212 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 KLK3P07288 261 aaPredicted RBP18.26■□□□□ 0.51
CCM2-216ENST00000488727 LIPCP11150 499 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 ACPPP15309 386 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 FASP25445 335 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 PCBP4P57723 403 aaKnown RBP18.26■□□□□ 0.51
CCM2-216ENST00000488727 PHEXP78562 749 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 SLC9A5Q14940 896 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 DEFB134Q4QY38 66 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 DEPDC1Q5TB30 811 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 ABHD13Q7L211 337 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 SHISA5Q8N114 240 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 LIX1Q8N485 282 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 ESX1Q8N693 406 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 MR1Q95460 341 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 NKD1Q969G9 470 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 MVB12AQ96EY5 273 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 TRIM8Q9BZR9 551 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 DPY30Q9C005 99 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 CLMPQ9H6B4 373 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 NAALAD2Q9Y3Q0 740 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 CHD8Q9HCK8 2581 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 IGF2RP11717 2491 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 CCDC88CQ9P219 2028 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 GALR3O60755 368 aaPredicted RBP18.26■□□□□ 0.51
CCM2-216ENST00000488727 KCNH1O95259 989 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 NSA2O95478 260 aaKnown RBP18.26■□□□□ 0.51
CCM2-216ENST00000488727 DGKQP52824 942 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 PLA2G16P53816 162 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 HMGCS1Q01581 520 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 LIN52Q52LA3 116 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 ABHD17CQ6PCB6 329 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 COX15Q7KZN9 410 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 FAM9CQ8IZT9 166 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 AMER3Q8N944 861 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 DNAJB8Q8NHS0 232 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 SNIP1Q8TAD8 396 aaKnown RBP18.26■□□□□ 0.51
CCM2-216ENST00000488727 MMABQ96EY8 250 aaPredicted RBP18.26■□□□□ 0.51
CCM2-216ENST00000488727 CNBD2Q96M20 576 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 SLC29A1Q99808 456 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 CIB1Q99828 191 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 C17orf62Q9BQA9 187 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 ACPTQ9BZG2 426 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 CHST8Q9H2A9 424 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 ANKHQ9HCJ1 492 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 ANAPC2Q9UJX6 822 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 PADI1Q9ULC6 663 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 AURKCQ9UQB9 309 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 AP3M1Q9Y2T2 418 aa18.26■□□□□ 0.51
CCM2-216ENST00000488727 DMXL2Q8TDJ6 3036 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 ZNF860A6NHJ4 632 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 SGK494L7N484 410 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 RTCAO00442 366 aaKnown RBP18.25■□□□□ 0.51
CCM2-216ENST00000488727 DNAJB6O75190 326 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 KLHL18O94889 574 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 FAM58BPP0C7Q3 252 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 PTX3P26022 381 aaPredicted RBP18.25■□□□□ 0.51
CCM2-216ENST00000488727 STAT5AP42229 794 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 DCDP81605 110 aaKnown RBP18.25■□□□□ 0.51
CCM2-216ENST00000488727 MYBPC1Q00872 1141 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 ZNF33BQ06732 778 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 PTGR1Q14914 329 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 NRF1Q16656 503 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 CYP51A1Q16850 503 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 NKAIN1Q4KMZ8 207 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 TMEM35AQ53FP2 167 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 FAM198BQ6UWH4 519 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 ZBTB49Q6ZSB9 765 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 IFNEQ86WN2 208 aa18.25■□□□□ 0.51
CCM2-216ENST00000488727 CARM1Q86X55 608 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms