RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 AP3S1Q92572 193 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 NSMAFQ92636 917 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 USP7Q93009 1102 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 NXPE2Q96DL1 559 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 C11orf24Q96F05 449 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 TMEM169Q96HH4 297 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 DIRAS2Q96HU8 199 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 RBM14Q96PK6 669 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 SLC38A2Q96QD8 506 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 OR2M2Q96R28 347 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 KCNA7Q96RP8 456 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 ATOH8Q96SQ7 321 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 EPYCQ99645 322 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 TTPALQ9BTX7 342 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 GPR63Q9BZJ6 419 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 MS4A7Q9GZW8 240 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 RNF32Q9H0A6 362 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 MED28Q9H204 178 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 IKZF5Q9H5V7 419 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 ALG9Q9H6U8 611 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 ANKRA2Q9H9E1 313 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 SLC28A3Q9HAS3 691 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 POPDC3Q9HBV1 291 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 B3GAT2Q9NPZ5 323 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 BIN3Q9NQY0 253 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 C1orf109Q9NX04 203 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 GPR83Q9NYM4 423 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 SLC25A37Q9NYZ2 338 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 COPZ2Q9P299 210 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 NLKQ9UBE8 527 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 PLEKHB1Q9UF11 243 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 TCEAL9Q9UHQ7 104 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 SIX4Q9UIU6 781 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 ING1Q9UK53 422 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 TSPAN16Q9UKR8 245 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 IKZF3Q9UKT9 509 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 ZNF490Q9ULM2 529 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 ABCG2Q9UNQ0 655 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 NCKAP1Q9Y2A7 1128 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 TMX2Q9Y320 296 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 SAMHD1Q9Y3Z3 626 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 ASB1Q9Y576 335 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 PCDHGA9Q9Y5G4 932 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 CFAP20Q9Y6A4 193 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 CLCA3PQ9Y6N3 262 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 ZNF236Q9UL36 1845 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 ANKRD31Q8N7Z5 1873 aa4.53□□□□□ -1.68
CDC42BPA-213ENST00000488131 A0A1W2PQ45 241 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 A0A1W2PQL4 384 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 A0A1W2PQY0 241 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TRABD2BA6NFA1 517 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 A8MVJ9 347 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 G3V3Q6 166 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 H7BY64 318 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 M0R233 179 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KCNK1O00180 336 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 DVL2O14641 736 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KLK8O60259 260 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CCNDBP1O95273 360 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 GLUD1P00367 558 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 FABP1P07148 127 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 FHP07954 510 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 RNASE1P07998 156 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SULT1A3P0DMM9 295 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SULT1A4P0DMN0 295 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 GAAP10253 952 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SELLP14151 372 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CD1DP15813 335 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 FDXRP22570 491 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 POU1F1P28069 291 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KIR2DL1P43626 348 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KIR2DL2P43627 348 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 KCNJ5P48544 419 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 HSPA7P48741 367 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 AKR1D1P51857 326 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 AGFG1P52594 562 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 RAG2P55895 527 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CYP4F8P98187 520 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CAMK2DQ13557 499 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MICBQ29980 383 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MPEG1Q2M385 716 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TTLL9Q3SXZ7 439 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ARHGAP15Q53QZ3 475 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SPIN4Q56A73 249 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 LRIF1Q5T3J3 769 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 HECTD2Q5U5R9 776 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 MANEALQ5VSG8 457 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 RNF219Q5W0B1 726 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ESRP1Q6NXG1 681 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TMEM207Q6UWW9 146 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 RNF165Q6ZSG1 346 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 FAM92BQ6ZTR7 304 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 PDZD4Q76G19 769 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 RAB11FIP2Q7L804 512 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 SHFQ7M4L6 423 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 GLCCI1Q86VQ1 547 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 TMEM132CQ8N3T6 1108 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 Q8N402 240 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 ATG16L2Q8NAA4 619 aa4.52□□□□□ -1.69
CDC42BPA-213ENST00000488131 CCNYQ8ND76 341 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms