RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 PRMT8Q9NR22 394 aaPredicted RBP2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 PIGVQ9NUD9 493 aa2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 MRTO4Q9UKD2 239 aaKnown RBP2.3□□□□□ -2.04
R3HDM1-219ENST00000488035 NPC1L1Q9UHC9 1359 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 KIF7Q2M1P5 1343 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 IQCMA0A1B0GVH7 501 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 MACROD2A1Z1Q3 448 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 RPL37AP8A6NKH3 93 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 NEDD8-MDP1E9PL57 170 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 CCSO14618 274 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 KIAA0513O60268 411 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 LRP3O75074 770 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 DUSP11O75319 330 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 FRAT2O75474 233 aaPredicted RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 REC8O95072 547 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 GSTA2P09210 222 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 MMP10P09238 476 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 CCDC159P0C7I6 412 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 OR9G9P0C7N8 305 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 ZCCHC18P0CG32 403 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 AREGP15514 252 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 HLA-DPA1P20036 260 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 GATA2P23769 480 aaPredicted RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 CAPGP40121 348 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 NT5C2P49902 561 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 GEMP55040 296 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 CASP9P55211 416 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 SRP54P61011 504 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 SRPXP78539 464 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 HSPA14Q0VDF9 509 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 EXOSC7Q15024 291 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 P2RY14Q15391 338 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 POM121L1PQ3SYA9 428 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 C9orf66Q5T8R8 295 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 WDR25Q64LD2 544 aaPredicted RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 STXBP4Q6ZWJ1 553 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 NUFIP2Q7Z417 695 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 RABEPKQ7Z6M1 372 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 ADAMTSL2Q86TH1 951 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 GTSCR1Q86UQ5 136 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 C17orf64Q86WR6 236 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 LMNTD2Q8IXW0 634 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 RTL3Q8N8U3 475 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 OR6M1Q8NGM8 313 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 URGCPQ8TCY9 931 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 NPRL2Q8WTW4 380 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 PCNPQ8WW12 178 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 ESAMQ96AP7 390 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 RAB3CQ96E17 227 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 CFAP36Q96G28 342 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 COG3Q96JB2 828 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 GPR137Q96N19 417 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 FAM213AQ9BRX8 229 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 MOB1AQ9H8S9 216 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 DBNDD1Q9H9R9 158 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 NMUR1Q9HB89 426 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 GDF3Q9NR23 364 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 THYN1Q9P016 225 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 NARFQ9UHQ1 456 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 TDRKHQ9Y2W6 561 aaKnown RBP2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 MOB4Q9Y3A3 225 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 FBXO7Q9Y3I1 522 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 HCFC1P51610 2035 aa2.29□□□□□ -2.04
R3HDM1-219ENST00000488035 ABCC9O60706 1549 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 IGHV3-16A0A0C4DH30 117 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 A0A0U1RRA0 63 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 TEX48A0A1B0GUV7 120 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 ACOD1A6NK06 481 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 TMCO5BA8MYB1 307 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 PDHXO00330 501 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 PHF1O43189 567 aaPredicted RBP2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 ATP6V1G1O75348 118 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 VENTXO95231 258 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 IGHV3-13P01766 116 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 IGHG1P01857 330 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 HOXD4P09016 255 aaPredicted RBP2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 FERP16591 822 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 FCARP24071 287 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 SHC1P29353 583 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 TNFRSF4P43489 277 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 CSRP3P50461 194 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 CCL11P51671 97 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 HNRNPFP52597 415 aaKnown RBP2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 NLRP11P59045 1033 aaKnown RBP2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 KRTAP12-2P59991 146 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 LMO4P61968 165 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 RPS4XP62701 263 aaKnown RBP2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 ARF5P84085 180 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 MS4A2Q01362 244 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 RAPSNQ13702 412 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 GPAT3Q53EU6 434 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 MPPE1Q53F39 396 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 UNC50Q53HI1 259 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 TCTEX1D4Q5JR98 221 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 MUC21Q5SSG8 566 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 NKAIN2Q5VXU1 208 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 LIPJQ5W064 366 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 LEMD1Q68G75 181 aa2.28□□□□□ -2.04
R3HDM1-219ENST00000488035 RTL6Q6ICC9 239 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms