RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 PSORS1C1Q9UIG5 152 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 TRMT6Q9UJA5 497 aaKnown RBP3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 RARRES3Q9UL19 164 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 SLC9A8Q9Y2E8 581 aa3.1□□□□□ -1.91
HMGB1P36-201ENST00000487709 IGHV3OR16-10A0A075B7F0 116 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 YJEFN3A6XGL0 299 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 G3V2L1 256 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 CSO75390 466 aaKnown RBP3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 STBD1O95210 358 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 CPNE6O95741 557 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 PDGFBP01127 241 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 NUDT17P0C025 328 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 HSD17B1P14061 328 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 PAX8Q06710 450 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 PDE7AQ13946 482 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 LY6DQ14210 128 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 EMC2Q15006 297 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 CCDC40Q4G0X9 1142 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 NKAIN2Q5VXU1 208 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 GTSCR1Q86UQ5 136 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 PHC2Q8IXK0 858 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 C11orf45Q8TAV5 145 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 SAP25Q8TEE9 199 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 PCED1BQ96HM7 432 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 EPSTI1Q96J88 318 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 RUNDC3BQ96NL0 473 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 PKP2Q99959 881 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 TRIM6Q9C030 488 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 SLC26A1Q9H2B4 701 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 HEXA-AS1Q9H8Q6 139 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 PIGVQ9NUD9 493 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 CTSZQ9UBR2 303 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 APPL1Q9UKG1 709 aa3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 SPAG9O60271 1321 aaKnown RBP3.09□□□□□ -1.91
HMGB1P36-201ENST00000487709 C5orf51A6NDU8 294 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SHISA7A6NL88 538 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 RNF212BA8MTL3 300 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 ARHGEF33A8MVX0 844 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 ANHXE9PGG2 379 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 ARPC1BO15143 372 aaKnown RBP3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SSX5O60225 188 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SNAP91O60641 907 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 DUSP11O75319 330 aaKnown RBP3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 GPX3P22352 226 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 GLRA1P23415 457 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 LMO2P25791 158 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 OR1D2P34982 312 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC1A4P43007 532 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 ACADSBP45954 432 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC7A2P52569 658 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 TRA2BP62995 288 aaKnown RBP3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 WASHC5Q12768 1159 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 GK2Q14410 553 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 P2RY14Q15391 338 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 CNPY1Q3B7I2 92 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 HIGD2BQ4VC39 106 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 GPAT3Q53EU6 434 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC10A5Q5PT55 438 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 REP15Q6BDI9 236 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 CDC42EP5Q6NZY7 148 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 NUFIP2Q7Z417 695 aaKnown RBP3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 PARP8Q8N3A8 854 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SAMD12Q8N8I0 201 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 ARL10Q8N8L6 244 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 OR1B1Q8NGR6 318 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 EXOC6Q8TAG9 804 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 TOMM40LQ969M1 308 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 C11orf52Q96A22 123 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLCO4A1Q96BD0 722 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 CDHR1Q96JP9 859 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 RCHY1Q96PM5 261 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SPXQ9BT56 116 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 NTMT1Q9BV86 223 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 DDX28Q9NUL7 540 aaKnown RBP3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 CYP39A1Q9NYL5 469 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 COPS7AQ9UBW8 275 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 SEC14L4Q9UDX3 406 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 TRIM10Q9UDY6 481 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 AFF2P51816 1311 aa3.08□□□□□ -1.92
HMGB1P36-201ENST00000487709 RNF103-CHMP3A0A140T963 221 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 A0A1B0GTH9 108 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 LOC390937A0A1W2PQ73 354 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC9B1P1A6NJY1 282 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 NME2P1O60361 137 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 CALCAP01258 141 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 FHP07954 510 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 ID1P41134 155 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 HNRNPFP52597 415 aaKnown RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 NDUFV3P56181 108 aaKnown RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 LMO4P61968 165 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 RPS27AP62979 156 aaKnown RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 HERV-K104P63124 156 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 ACY1Q03154 408 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 LASP1Q14847 261 aaKnown RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC17A1Q14916 467 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 CDC37Q16543 378 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 HAGHQ16775 308 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 GLIPR1L2Q4G1C9 344 aa3.07□□□□□ -1.92
HMGB1P36-201ENST00000487709 NEPROQ6NW34 567 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms