RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 H0YCG3 227 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 C16orf97H3BN30 126 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 K7ERI5 159 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 HAS3O00219 553 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 RNF103O00237 685 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 TULP2O00295 520 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CAPN9O14815 690 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CETN3O15182 167 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 SLC16A4O15374 487 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CALUO43852 315 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ACSL4O60488 711 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 GNA14O95837 355 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 APOHP02749 345 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ALPPP05187 535 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ALPPL2P10696 532 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 F3P13726 295 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 GOT1P17174 413 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 LHCGRP22888 699 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 GLRA2P23416 452 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 MARK3P27448 753 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CHRNA7P36544 502 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 NAMPTP43490 491 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 HOXA1P49639 335 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 MAZP56270 477 aaKnown RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 PEX3P56589 373 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 SNRPFP62306 86 aaKnown RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 PITX1P78337 314 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 BEX3Q00994 111 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 SLC34A1Q06495 639 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CETN1Q12798 172 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 DMP1Q13316 513 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 SQLEQ14534 574 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 MXD4Q14582 209 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 EMC2Q15006 297 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 HERC3Q15034 1050 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ACKR1Q16570 336 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 FILIP1LQ4L180 1135 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 SLC35D3Q5M8T2 416 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 MARCH8Q5T0T0 291 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 AWAT2Q6E213 333 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ZNF770Q6IQ21 691 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 BTN2A1Q7KYR7 527 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 APTXQ7Z2E3 356 aaKnown RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 SPATA2LQ8IUW3 424 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 TMEM126BQ8IUX1 230 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 NELFCDQ8IXH7 590 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 C12orf56Q8IXR9 622 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ZC3H3Q8IXZ2 948 aaKnown RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 Q8N9P0 234 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 SMYD1Q8NB12 490 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 TMEM161BQ8NDZ6 487 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ANKRD20A12PQ8NF67 263 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 KBTBD8Q8NFY9 601 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 OR52N5Q8NH56 324 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 GOLGA5Q8TBA6 731 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 RAET1EQ8TD07 263 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 TCP11Q8WWU5 503 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 RFT1Q96AA3 541 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 TMEM143Q96AN5 459 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 EEF2KMTQ96G04 330 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CFAP36Q96G28 342 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 IGSF21Q96ID5 467 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 IFT74Q96LB3 600 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 NAP1L5Q96NT1 182 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ACCSQ96QU6 501 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CTAGE1Q96RT6 745 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 RASL10BQ96S79 203 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 TSG101Q99816 390 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ZPBPQ9BS86 351 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 RHNO1Q9BSD3 238 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 XPO4Q9C0E2 1151 aaKnown RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 POLR3FQ9H1D9 316 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 UPF3AQ9H1J1 476 aaKnown RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 UBQLN3Q9H347 655 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 C10orf88Q9H8K7 445 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 SYTL2Q9HCH5 934 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CHST11Q9NPF2 352 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 PRMT8Q9NR22 394 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 MRPL17Q9NRX2 175 aaKnown RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 DMAC2Q9NW81 257 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 IFNKQ9P0W0 207 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CGNQ9P2M7 1197 aaKnown RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 EXOC7Q9UPT5 735 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ZNF510Q9Y2H8 683 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 NSG2Q9Y328 171 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 MTF2Q9Y483 593 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-216ENST00000487043 R4GN57 208 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 MYH11P35749 1972 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 CASP8AP2Q9UKL3 1982 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 NRCAMQ92823 1304 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ZSWIM8A7E2V4 1837 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 ARID2Q68CP9 1835 aa3.65□□□□□ -1.83
PTCD3-216ENST00000487043 A0A087X0K7 114 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 MAGEB16A2A368 324 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 DENND3A2RUS2 1198 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 MBLAC1A4D2B0 266 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-216ENST00000487043 FAM149AA5PLN7 773 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 ANKDD1BA6NHY2 528 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 SLC9B1P1A6NJY1 282 aa3.64□□□□□ -1.83
PTCD3-216ENST00000487043 NPIPA3F8WFD2 350 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms