RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 SLC33A1O00400 549 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 PRSS56P0CW18 603 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 PORP16435 677 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 SLC9B2Q86UD5 537 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 CLECL1Q8IZS7 167 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 NETO1Q8TDF5 533 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 LRR1Q96L50 414 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 HSPA12BQ96MM6 686 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 POLDIP3Q9BY77 421 aaKnown RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 XKR8Q9H6D3 395 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 SPHK2Q9NRA0 654 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 FAIMQ9NVQ4 179 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 E7EQ34 232 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 CSTBP04080 98 aaKnown RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 ASGR2P07307 311 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 RIN1Q13671 783 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 NXPE4Q6UWF7 544 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 ARFGAP1Q8N6T3 406 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 NAV1Q8NEY1 1877 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 TMEM125Q96AQ2 219 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 TMIGD2Q96BF3 282 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 NPLQ9BXD5 320 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 PARPBPQ9NWS1 579 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 ZDHHC7Q9NXF8 308 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 LATS1O95835 1130 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 CFIP05156 583 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 FAM214AQ32MH5 1076 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 B3GNT9Q6UX72 402 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 MAMDC4Q6UXC1 1216 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 BAIAP2L2Q6UXY1 529 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 MFSD2AQ8NA29 543 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 LSM14AQ8ND56 463 aaKnown RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 TSTD1Q8NFU3 115 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF689Q96CS4 500 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 P2RY13Q9BPV8 354 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 C14orf166Q9Y224 244 aaKnown RBP15.74■□□□□ 0.11
COL7A1-210ENST00000487017 C1orf226A1L170 272 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 RETP07949 1114 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 ANXA3P12429 323 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 SRCP12931 536 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 HRH2P25021 359 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 PAGE3Q5JUK9 113 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 PNCKQ6P2M8 343 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 UGT2A3Q6UWM9 527 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 FAM86B1Q8N7N1 296 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 SLC29A1Q99808 456 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 GPRC5BQ9NZH0 403 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 SH2B3Q9UQQ2 575 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 PLEKHA6Q9Y2H5 1048 aa15.74■□□□□ 0.11
COL7A1-210ENST00000487017 C2orf78A6NCI8 922 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 H3BMQ9 156 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 PRKYO43930 277 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 RP2O75695 350 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 KCNJ5P48544 419 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 SLAMF1Q13291 335 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 GRK1Q15835 563 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 ZNF789Q5FWF6 425 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 C12orf40Q86WS4 652 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 SLC44A3Q8N4M1 653 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 OR6N2Q8NGY6 317 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 FRS2Q8WU20 508 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 UTP4Q969X6 686 aaKnown RBP15.73■□□□□ 0.11
COL7A1-210ENST00000487017 COG8Q96MW5 612 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 A8MU76 341 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 RGS9O75916 674 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-210ENST00000487017 HCKP08631 526 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 ETFAP13804 333 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 BPIP17213 487 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 GCAP28676 217 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 GCGRP47871 477 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 PLGLB1Q02325 96 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.73■□□□□ 0.11
COL7A1-210ENST00000487017 SLC25A25Q6KCM7 469 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 GPR150Q8NGU9 434 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 F2RL3Q96RI0 385 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 C11orf49Q9H6J7 331 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 ACSL6Q9UKU0 697 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 KLHL33A6NCF5 533 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 PTGESO14684 152 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 VEGFDO43915 354 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 LHCGRP22888 699 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 ARL3P36405 182 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 GNG2P59768 71 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 RPS26P62854 115 aaKnown RBP15.73■□□□□ 0.11
COL7A1-210ENST00000487017 RIPPLY1Q0D2K3 151 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 OR52N2Q8NGI0 321 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 RPLP0P6Q8NHW5 317 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 TMEM246Q9BRR3 403 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 MYH15Q9Y2K3 1946 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 CCDC88AQ3V6T2 1871 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 A0A1B0GVI7 797 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 ADAP00813 363 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 SLC9A3P48764 834 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 BMXP51813 675 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 P4HA3Q7Z4N8 544 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 ASPGQ86U10 573 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 CCDC28AQ8IWP9 274 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 DTWD1Q8N5C7 304 aa15.73■□□□□ 0.11
COL7A1-210ENST00000487017 KLRF1Q9NZS2 232 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms