RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 GPR22Q99680 433 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 ZNF703Q9H7S9 590 aaPredicted RBP17.27■□□□□ 0.36
GMDS-205ENST00000486793 ACKR4Q9NPB9 350 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 ZNF358Q9NW07 568 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 TXNDC16Q9P2K2 825 aa17.27■□□□□ 0.36
GMDS-205ENST00000486793 LRRC3CA6NJW4 275 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 SYT5O00445 386 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 RAB10P61026 200 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 MRPS25P82663 173 aaKnown RBP17.26■□□□□ 0.35
GMDS-205ENST00000486793 ZKSCAN8Q15776 578 aaPredicted RBP17.26■□□□□ 0.35
GMDS-205ENST00000486793 C18orf63Q68DL7 685 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 GPR180Q86V85 440 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 ULK2Q8IYT8 1036 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 FAM13CQ8NE31 585 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 OR10G3Q8NGC4 313 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 NEIL3Q8TAT5 605 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 STAG3L4Q8TBR4 150 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 NINJ1Q92982 152 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 RGMAQ96B86 450 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 JSRP1Q96MG2 331 aaPredicted RBP17.26■□□□□ 0.35
GMDS-205ENST00000486793 RBBP8Q99708 897 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 CPNE1Q99829 537 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 GPATCH1Q9BRR8 931 aaKnown RBP17.26■□□□□ 0.35
GMDS-205ENST00000486793 SLC6A15Q9H2J7 730 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 ALG9Q9H6U8 611 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 MS4A12Q9NXJ0 267 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 CRIM1Q9NZV1 1036 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 CNIH4Q9P003 139 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 B4GALT7Q9UBV7 327 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 BOKQ9UMX3 212 aaPredicted RBP17.26■□□□□ 0.35
GMDS-205ENST00000486793 PCDHGB3Q9Y5G1 929 aa17.26■□□□□ 0.35
GMDS-205ENST00000486793 DNAJC13O75165 2243 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 PRRC2AP48634 2157 aaKnown RBP17.25■□□□□ 0.35
GMDS-205ENST00000486793 IQANK1A0A1B0GTG1 560 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 FAM221AA4D161 298 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 HSPB2A8KAH6 182 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 PRKRAO75569 313 aaKnown RBP17.25■□□□□ 0.35
GMDS-205ENST00000486793 FBXO45P0C2W1 286 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 ALOX15P16050 662 aaPredicted RBP17.25■□□□□ 0.35
GMDS-205ENST00000486793 SERPINB3P29508 390 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 SERPINB1P30740 379 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 UQCRC1P31930 480 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 TRPC1P48995 793 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 PLIN5Q00G26 463 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 PCDH1Q08174 1060 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 TBL3Q12788 808 aaKnown RBP17.25■□□□□ 0.35
GMDS-205ENST00000486793 DDX39BQ13838 428 aaKnown RBP17.25■□□□□ 0.35
GMDS-205ENST00000486793 ZNF267Q14586 743 aaPredicted RBP17.25■□□□□ 0.35
GMDS-205ENST00000486793 HSPB2Q16082 182 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 CYS1Q717R9 158 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 ISCA2Q86U28 154 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 TGIF2LYQ8IUE0 185 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 FBXW8Q8N3Y1 598 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 CHDHQ8NE62 594 aaPredicted RBP17.25■□□□□ 0.35
GMDS-205ENST00000486793 HUS1BQ8NHY5 278 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 ART5Q96L15 291 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 CLEC4MQ9H2X3 399 aaPredicted RBP17.25■□□□□ 0.35
GMDS-205ENST00000486793 SAYSD1Q9NPB0 183 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 RASSF1Q9NS23 344 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.25■□□□□ 0.35
GMDS-205ENST00000486793 ST6GALNAC2Q9UJ37 374 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 CHCHD2Q9Y6H1 151 aaPredicted RBP17.25■□□□□ 0.35
GMDS-205ENST00000486793 HCFC1P51610 2035 aa17.25■□□□□ 0.35
GMDS-205ENST00000486793 AKAP6Q13023 2319 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 ACANP16112 2415 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 TCRBV9S1A1TA0A576 114 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 CCDC188H7C350 402 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 K7EPI3 171 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 LRATO95237 230 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 GPR75O95800 540 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 C1QAP02745 245 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 TLX1P31314 330 aaPredicted RBP17.24■□□□□ 0.35
GMDS-205ENST00000486793 GP5P40197 560 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 HERVK_113P63132 956 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 ERVK-8P63133 956 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 TNFRSF17Q02223 184 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 DLG1Q12959 904 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 CEBPEQ15744 281 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 C3orf62Q6ZUJ4 267 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 SLC29A4Q7RTT9 530 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 DND1Q8IYX4 353 aaKnown RBP17.24■□□□□ 0.35
GMDS-205ENST00000486793 ST13P4Q8IZP2 240 aaPredicted RBP17.24■□□□□ 0.35
GMDS-205ENST00000486793 GAL3ST4Q96RP7 486 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 ERVK-6Q9BXR3 956 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 QPCTLQ9NXS2 382 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 NUDT4Q9NZJ9 180 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 OPTCQ9UBM4 332 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 ADGRE2Q9UHX3 823 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 CNOT11Q9UKZ1 510 aaKnown RBP17.24■□□□□ 0.35
GMDS-205ENST00000486793 ERVK-19Q9WJR5 959 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 SAR1BQ9Y6B6 198 aa17.24■□□□□ 0.35
GMDS-205ENST00000486793 FAM159BA6NKW6 160 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 UBXN8O00124 270 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 PLPP1O14494 284 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 PROM1O43490 865 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 KLK2P20151 261 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 BMP5P22003 454 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 RAP1GDS1P52306 607 aa17.23■□□□□ 0.35
GMDS-205ENST00000486793 HNRNPH2P55795 449 aaKnown RBP17.23■□□□□ 0.35
GMDS-205ENST00000486793 TMEM64Q6YI46 380 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms