RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 RAB8AP61006 207 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 KCNC4Q03721 635 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 PMS2P3Q13401 168 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 SIM2Q14190 667 aaPredicted RBP19.26■□□□□ 0.67
HPS3-206ENST00000486530 GPR18Q14330 331 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 SLC22A18ASQ8N1D0 253 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 PIP5K1AQ99755 562 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 GSDMCQ9BYG8 508 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 LMAN1LQ9HAT1 526 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 ZCCHC3Q9NUD5 404 aaKnown RBP19.26■□□□□ 0.67
HPS3-206ENST00000486530 P2RX2Q9UBL9 471 aa19.26■□□□□ 0.67
HPS3-206ENST00000486530 NDRG4Q9ULP0 352 aaKnown RBP19.26■□□□□ 0.67
HPS3-206ENST00000486530 SLC1A7O00341 560 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 ERAL1O75616 437 aaKnown RBP19.25■□□□□ 0.67
HPS3-206ENST00000486530 VIPP01282 170 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 CCDC159P0C7I6 412 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 SLC35G6P0C7Q6 338 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 UGT2B7P16662 529 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 JUNBP17275 347 aaPredicted RBP19.25■□□□□ 0.67
HPS3-206ENST00000486530 CDK5R2Q13319 367 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 RAB39AQ14964 217 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 RPS26P11Q5JNZ5 115 aaPredicted RBP19.25■□□□□ 0.67
HPS3-206ENST00000486530 LAIR2Q6ISS4 152 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 SLC48A1Q6P1K1 146 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 BHLHB9Q6PI77 547 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 SYT13Q7L8C5 426 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 MOAP1Q96BY2 351 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 TOE1Q96GM8 510 aaKnown RBP19.25■□□□□ 0.67
HPS3-206ENST00000486530 PITX2Q99697 317 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 GABARAPL3Q9BY60 117 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 CYP8B1Q9UNU6 501 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 SH3GLB1Q9Y371 365 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 FAM32AQ9Y421 112 aaKnown RBP19.25■□□□□ 0.67
HPS3-206ENST00000486530 ENPP4Q9Y6X5 453 aa19.25■□□□□ 0.67
HPS3-206ENST00000486530 FAM221BA6H8Z2 402 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 GLOD5A6NK44 160 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 A8MVJ9 347 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 PGRMC2O15173 223 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 IFNW1P05000 195 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 MAGP20916 626 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 SLC5A2P31639 672 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 NUDT1P36639 197 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 KHKP50053 298 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 ANXA11P50995 505 aaKnown RBP19.24■□□□□ 0.67
HPS3-206ENST00000486530 CDH12P55289 794 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 NPRL3Q12980 569 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 FZD5Q13467 585 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 SZRD1Q7Z422 152 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 CLVS1Q8IUQ0 354 aaPredicted RBP19.24■□□□□ 0.67
HPS3-206ENST00000486530 OR10G2Q8NGC3 310 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 RASSF5Q8WWW0 418 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 RAB8BQ92930 207 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 MPP4Q96JB8 637 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 ZNF607Q96SK3 696 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 ROGDIQ9GZN7 287 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 SERHL2Q9H4I8 314 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 SLC24A3Q9HC58 644 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 GIMAP4Q9NUV9 329 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 ACTR10Q9NZ32 417 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 CES1P1Q9UKY3 287 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 GSAPA4D1B5 854 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 PROM1O43490 865 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 ANXA8P13928 327 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 RHCEP18577 417 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 CD247P20963 164 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 AGXTP21549 392 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 BTN3A2P78410 334 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 GAS6Q14393 721 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 NEDD8Q15843 81 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 ZNF605Q86T29 641 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 TRIM73Q86UV7 250 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 TSPYL5Q86VY4 417 aaPredicted RBP19.24■□□□□ 0.67
HPS3-206ENST00000486530 SLC44A2Q8IWA5 706 aaPredicted RBP19.24■□□□□ 0.67
HPS3-206ENST00000486530 SUN3Q8TAQ9 357 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 THAP11Q96EK4 314 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 CNRIP1Q96F85 164 aaPredicted RBP19.24■□□□□ 0.67
HPS3-206ENST00000486530 OR51I1Q9H343 314 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 CXorf21Q9HAI6 301 aa19.24■□□□□ 0.67
HPS3-206ENST00000486530 OR6C74A6NCV1 312 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 OR5K4A6NMS3 321 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 WASHC1A8K0Z3 465 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 E9PQ18 207 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 MFN2O95140 757 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 ANGPTL1O95841 491 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 POLR2CP19387 275 aaPredicted RBP19.23■□□□□ 0.67
HPS3-206ENST00000486530 CSNK2A2P19784 350 aaPredicted RBP19.23■□□□□ 0.67
HPS3-206ENST00000486530 PPP2R1BP30154 601 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 MAPK11Q15759 364 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 DUSP7Q16829 419 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 MICAQ29983 383 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 CYP27C1Q4G0S4 372 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 C18orf63Q68DL7 685 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 FBXO42Q6P3S6 717 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 KCT2Q8NC54 265 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 OR56A1Q8NGH5 318 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 OR10G6Q8NH81 332 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 ZNF420Q8TAQ5 688 aaPredicted RBP19.23■□□□□ 0.67
HPS3-206ENST00000486530 CNIH3Q8TBE1 160 aa19.23■□□□□ 0.67
HPS3-206ENST00000486530 APOBEC4Q8WW27 367 aaKnown RBP19.23■□□□□ 0.67
HPS3-206ENST00000486530 ISOC1Q96CN7 298 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms