RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 CERS1P27544 350 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 SOAT1P35610 550 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 CHI3L1P36222 383 aaPredicted RBP13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 LSSP48449 732 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 BTN3A2P78410 334 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 CCL7P80098 99 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 SPIDRQ14159 915 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 ABHD13Q7L211 337 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 AMIGO2Q86SJ2 522 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 PTOV1Q86YD1 416 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 ZFP28Q8NHY6 868 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 ZCCHC14Q8WYQ9 949 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 EXOSC8Q96B26 276 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 CENPNQ96H22 339 aaPredicted RBP13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 SMIM10Q96HG1 83 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 BTBD9Q96Q07 612 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 SERINC2Q96SA4 455 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 CHID1Q9BWS9 393 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 NRSN2Q9GZP1 204 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 KLHL25Q9H0H3 589 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 CHST8Q9H2A9 424 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 MAGIXQ9H6Y5 334 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 UTS2RQ9UKP6 389 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 SAMD4AQ9UPU9 718 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 PTPRBP23467 1997 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 ASXL3Q9C0F0 2248 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 A0A1W2PR48 441 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 H0YGG7 62 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 CASC3O15234 703 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 TPST1O60507 370 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 SERPINA1P01009 418 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 C1QCP02747 245 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 RPLP0P05388 317 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 RPSAP08865 295 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 PVRP15151 417 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 CDH3P22223 829 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 NTSP30990 170 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 CRATP43155 626 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 CAPZBP47756 277 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 AQP4P55087 323 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 ARF3P61204 181 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 RBBP4Q09028 425 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 ATP6AP1Q15904 470 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 ADRM1Q16186 407 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 ISXQ2M1V0 245 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 FKBP9P1Q75LS8 142 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 CLEC4FQ8N1N0 589 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 C11orf65Q8NCR3 313 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 FBXO30Q8TB52 745 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 FAM110BQ8TC76 370 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 SLC47A1Q96FL8 570 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 GFM1Q96RP9 751 aaKnown RBP13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 LRRN3Q9H3W5 708 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 SLC35C2Q9NQQ7 365 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 C8orf4Q9NR00 106 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 PHF11Q9UIL8 331 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 RPS6KA6Q9UK32 745 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 FBXW2Q9UKT8 454 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 FAF1Q9UNN5 650 aaPredicted RBP13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 ATG4BQ9Y4P1 393 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 AK5Q9Y6K8 562 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 V9GYQ6 96 aa13.78□□□□□ -0.2
POLR2J3-204ENST00000486319 RNF103-CHMP3A0A140T963 221 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 NTN3O00634 580 aaPredicted RBP13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 PROM1O43490 865 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 LDLRP01130 860 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 ALDH4A1P30038 563 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 KDELR2P33947 212 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 PCGF2P35227 344 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 HSPA13P48723 471 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 MVDP53602 400 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 ZC3H12BQ5HYM0 836 aaKnown RBP13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 GCNT6Q5T4J0 391 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 FRMPD2BQ6IN97 320 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 SLC48A1Q6P1K1 146 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 SPRED1Q7Z699 444 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 PSMA8Q8TAA3 256 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 NXPE2Q96DL1 559 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 PYURFQ96I23 114 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 TRAPPC9Q96Q05 1148 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 BDH2Q9BUT1 245 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 C9orf16Q9BUW7 83 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 TRIM4Q9C037 500 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 CXorf36Q9H7Y0 433 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 SLAMF7Q9NQ25 335 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 PRDM9Q9NQV7 894 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 C1GALT1Q9NS00 363 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 GIMAP4Q9NUV9 329 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 GPATCH2Q9NW75 528 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 MS4A12Q9NXJ0 267 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 PSME2Q9UL46 239 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 ZMIZ1Q9ULJ6 1067 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 ENTPD4Q9Y227 616 aa13.77□□□□□ -0.21
POLR2J3-204ENST00000486319 LOC105369274A0A096LPK9 316 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 LOC102723532A0A0G2JNH3 316 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 A0A1W2PQM1 296 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 P2RX6O15547 441 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 B3GALT2O43825 422 aa13.76□□□□□ -0.21
POLR2J3-204ENST00000486319 DEAF1O75398 565 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms