RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 LRRC40Q9H9A6 602 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 PRTFDC1Q9NRG1 225 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 HOMER3Q9NSC5 361 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 ELOVL5Q9NYP7 299 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 CNIH4Q9P003 139 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 RIMKLBQ9ULI2 386 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 HYOU1Q9Y4L1 999 aa7.47□□□□□ -1.21
XRN1-212ENST00000486211 MAGED1Q9Y5V3 778 aaPredicted RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 BZW2Q9Y6E2 419 aaKnown RBP7.47□□□□□ -1.21
XRN1-212ENST00000486211 FAM234BA2RU67 622 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 ANKRD33BA6NCL7 494 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 APOC4-APOC2K7ER74 178 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 EIF3FO00303 357 aaPredicted RBP7.46□□□□□ -1.22
XRN1-212ENST00000486211 SMNDC1O75940 238 aaKnown RBP eCLIP7.46□□□□□ -1.22
XRN1-212ENST00000486211 METTL18O95568 372 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 TGM6O95932 706 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 CGAP01215 116 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 APOC2P02655 101 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 SERPING1P05155 500 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 CDH1P12830 882 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 TNNT1P13805 278 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 CTNNA2P26232 953 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 TTPAP49638 278 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 RAB8AP61006 207 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 NFKBIBQ15653 356 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 ODF2Q5BJF6 829 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 BBS12Q6ZW61 710 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 STRA8Q7Z7C7 330 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 LRRC6Q86X45 466 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 REXO1L1PQ8IX06 675 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 TC2NQ8N9U0 490 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 OR52K1Q8NGK4 314 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 OR5L2Q8NGL0 311 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 SLC2A12Q8TD20 617 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 ASB11Q8WXH4 323 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 CTNNBL1Q8WYA6 563 aaPredicted RBP7.46□□□□□ -1.22
XRN1-212ENST00000486211 UCN3Q969E3 161 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 FAM136AQ96C01 138 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 CTHRC1Q96CG8 243 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 PLPPR2Q96GM1 343 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 OR8D2Q9GZM6 311 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 MRPL18Q9H0U6 180 aaKnown RBP7.46□□□□□ -1.22
XRN1-212ENST00000486211 C12orf65Q9H3J6 166 aaKnown RBP7.46□□□□□ -1.22
XRN1-212ENST00000486211 CCDC177Q9NQR7 707 aaPredicted RBP7.46□□□□□ -1.22
XRN1-212ENST00000486211 CATSPERZQ9NTU4 200 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 FETUBQ9UGM5 382 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 TRIM33Q9UPN9 1127 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 C15orf41Q9Y2V0 281 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 CLCA3PQ9Y6N3 262 aa7.46□□□□□ -1.22
XRN1-212ENST00000486211 MYOCOSA0A1B0GUC4 107 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 CD3EAPO15446 510 aaKnown RBP7.45□□□□□ -1.22
XRN1-212ENST00000486211 OR1F1O43749 312 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 NRDCO43847 1150 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 ALX3O95076 343 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 SYF2O95926 243 aaKnown RBP7.45□□□□□ -1.22
XRN1-212ENST00000486211 ACTL6AO96019 429 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 CRHP06850 196 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 FSTP19883 344 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 KIR2DL2P43627 348 aaPredicted RBP7.45□□□□□ -1.22
XRN1-212ENST00000486211 CCZ1BP86790 482 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 CCZ1P86791 482 aaPredicted RBP7.45□□□□□ -1.22
XRN1-212ENST00000486211 MYL5Q02045 173 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 RUNX2Q13950 521 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 PARP6Q2NL67 630 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 PGGHGQ32M88 737 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 MIDNQ504T8 468 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 BICRALQ6AI39 1079 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 CLNKQ7Z7G1 428 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 C17orf64Q86WR6 236 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 CDKL3Q8IVW4 592 aaPredicted RBP7.45□□□□□ -1.22
XRN1-212ENST00000486211 C9orf40Q8IXQ3 194 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 C3orf56Q8N813 242 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 FAM13CQ8NE31 585 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 ABHD11Q8NFV4 315 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 OR4K1Q8NGD4 311 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 OR14A16Q8NHC5 309 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 GABPB2Q8TAK5 448 aaPredicted RBP7.45□□□□□ -1.22
XRN1-212ENST00000486211 NUBPLQ8TB37 319 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 SLC35G2Q8TBE7 412 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 RAB3IL1Q8TBN0 382 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 ACTL9Q8TC94 416 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 ZNF721Q8TF20 911 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 DAZLQ92904 295 aaKnown RBP7.45□□□□□ -1.22
XRN1-212ENST00000486211 LRRC45Q96CN5 670 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 PGM2Q96G03 612 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 HS6ST2Q96MM7 605 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 GNRHR2Q96P88 292 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 SLC39A3Q9BRY0 314 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 PCBD2Q9H0N5 130 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 SPNS1Q9H2V7 528 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 KLHL31Q9H511 634 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 ZNF696Q9H7X3 374 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 CHODLQ9H9P2 273 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 BARX1Q9HBU1 254 aaPredicted RBP7.45□□□□□ -1.22
XRN1-212ENST00000486211 VTI1BQ9UEU0 232 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 KCNS2Q9ULS6 477 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 MAPRE3Q9UPY8 281 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 ZNF148Q9UQR1 794 aa7.45□□□□□ -1.22
XRN1-212ENST00000486211 PRR14LQ5THK1 2151 aa7.44□□□□□ -1.22
XRN1-212ENST00000486211 KMT2CQ8NEZ4 4911 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms