RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 FAM53CQ9NYF3 392 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 PSD3Q9NYI0 1048 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 C5AR2Q9P296 337 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 IL17BQ9UHF5 180 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 PHF11Q9UIL8 331 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 MCM8Q9UJA3 840 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ADAM21Q9UKJ8 722 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ZMIZ1Q9ULJ6 1067 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 DAPP1Q9UN19 280 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 EIF3LQ9Y262 564 aaKnown RBP5.3□□□□□ -1.56
COPS3-208ENST00000486032 DLGAP4Q9Y2H0 992 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ATG4BQ9Y4P1 393 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 CCL27Q9Y4X3 112 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 EPG5Q9HCE0 2579 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 ITPR1Q14643 2758 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 APC2O95996 2303 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 CCDC88CQ9P219 2028 aa5.3□□□□□ -1.56
COPS3-208ENST00000486032 TPRP12270 2363 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 CFAP47Q6ZTR5 3102 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 FER1L5A0AVI2 2057 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 A0A1W2PR48 441 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 CLDN4O14493 209 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 ZNF195O14628 629 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 PGRMC2O15173 223 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 UBDO15205 165 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 LDB3O75112 727 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 CNOT3O75175 753 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 GUCY1B2O75343 617 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 VPS4BO75351 444 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 BMP10O95393 424 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 AIFM1O95831 613 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 IFNA16P05015 189 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 FHP07954 510 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 NR2F6P10588 404 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 PRKAR1AP10644 381 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 G6PDP11413 515 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 PRPS2P11908 318 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 BCKDHAP12694 445 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 LIFP15018 202 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 SDC1P18827 310 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 TNNI3P19429 210 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 WT1P19544 449 aaPredicted RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 EFNA1P20827 205 aaPredicted RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 MAOAP21397 527 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 DRD4P21917 467 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 F8A1P23610 371 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 TACR1P25103 407 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 ITPKBP27987 946 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 TLX1P31314 330 aaPredicted RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 PTGER1P34995 402 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 EIF2S3P41091 472 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 STAT5AP42229 794 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 DIO3P55073 304 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 STX1BP61266 288 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 ERVK-8P63133 956 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 TNFRSF17Q02223 184 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 EEF1A2Q05639 463 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 KLC1Q07866 573 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 STX4Q12846 297 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 MAD2L1Q13257 205 aaPredicted RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 MAP7Q14244 749 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 PTGR1Q14914 329 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 KIAA0040Q15053 153 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 NCF4Q15080 339 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 ST3GAL2Q16842 350 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 ZNF750Q32MQ0 723 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 PGS1Q32NB8 556 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 LSM12Q3MHD2 195 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 ATP1A1-AS1Q5TC04 95 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 NDUFAF5Q5TEU4 345 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 C19orf48Q6RUI8 117 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 EPGNQ6UW88 154 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 LARP4Q71RC2 724 aaKnown RBP eCLIP5.29□□□□□ -1.56
COPS3-208ENST00000486032 ZC3H7AQ8IWR0 971 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 HOMEZQ8IX15 550 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 ZCCHC7Q8N3Z6 543 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 ZNF248Q8NDW4 579 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 CEP70Q8NHQ1 597 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 TSLPQ969D9 159 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 EXOSC8Q96B26 276 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 TBC1D20Q96BZ9 403 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 C8orf44Q96CB5 159 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 TM4SF18Q96CE8 201 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 KLHL29Q96CT2 875 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 ZNF317Q96PQ6 595 aaPredicted RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 CCT7Q99832 543 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 FAIM2Q9BWQ8 316 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 NPLQ9BXD5 320 aaPredicted RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 SPRY4Q9C004 299 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 DPY30Q9C005 99 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 ACTL8Q9H568 366 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 RPF2Q9H7B2 306 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 LYRM4Q9HD34 91 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 MKKSQ9NPJ1 570 aaPredicted RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 TCF7L2Q9NQB0 619 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 MIEF1Q9NQG6 463 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 NECTIN3Q9NQS3 549 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 PNO1Q9NRX1 252 aaKnown RBP5.29□□□□□ -1.56
COPS3-208ENST00000486032 C14orf105Q9NVL8 296 aa5.29□□□□□ -1.56
COPS3-208ENST00000486032 KCMF1Q9P0J7 381 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms