RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SGCZQ96LD1 299 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 GPR137Q96N19 417 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 ERVK-6Q9BXR3 956 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 WDR41Q9HAD4 459 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 SIRT5Q9NXA8 310 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 TMEM216Q9P0N5 145 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 PSMC3IPQ9P2W1 217 aaPredicted RBP6.51□□□□□ -1.37
VPS50-218ENST00000485994 XPR1Q9UBH6 696 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 TRPS1Q9UHF7 1281 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 ZNF225Q9UK10 706 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 FBXW2Q9UKT8 454 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 SNX6Q9UNH7 406 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 STK38LQ9Y2H1 464 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 KLF13Q9Y2Y9 288 aaPredicted RBP6.51□□□□□ -1.37
VPS50-218ENST00000485994 ATG4BQ9Y4P1 393 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 UNC79Q9P2D8 2635 aa6.51□□□□□ -1.37
VPS50-218ENST00000485994 TRBV11-1A0A0K0K1C0 115 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 A0A1W2PR48 441 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 OR6C76A6NM76 312 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 FIGNL2A6NMB9 653 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 LRRTM2O43300 516 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 ASNA1O43681 348 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 DYRK3O43781 588 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 TMPRSS11DO60235 418 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 FGF17O60258 216 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 PRKNO60260 465 aaPredicted RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 DLX3O60479 287 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 LDB3O75112 727 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 EEDO75530 441 aaKnown RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 SLC25A12O75746 678 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 F10P00742 488 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 RHOXF2BP0C7M4 288 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 ALOX15P16050 662 aaPredicted RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 TNNI3P19429 210 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 AGAP20933 346 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 CNR1P21554 472 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 CCT5P48643 541 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 NEK2P51955 445 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 PRKAA2P54646 552 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 PKNOX1P55347 436 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 HNRNPH2P55795 449 aaKnown RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 DNAJB13P59910 316 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 RNF4P78317 190 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 TNFRSF17Q02223 184 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 ALDH6A1Q02252 535 aaKnown RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 OC90Q02509 493 aaPredicted RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 FOLH1Q04609 750 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 CLCQ05315 142 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 FUT7Q11130 342 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 MAPKAPK3Q16644 382 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 SPRED3Q2MJR0 410 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 CCDC153Q494R4 210 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 UNC50Q53HI1 259 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 C4orf48Q5BLP8 95 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 C18orf63Q68DL7 685 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 OPN5Q6U736 354 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 GFRALQ6UXV0 394 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 RGS9BPQ6ZS82 235 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 GALNTL5Q7Z4T8 443 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 NUDT13Q86X67 352 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 SULF2Q8IWU5 870 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 DND1Q8IYX4 353 aaKnown RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 SLC34A3Q8N130 599 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 RNF175Q8N4F7 328 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 TMEM156Q8N614 296 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 GBP7Q8N8V2 638 aaPredicted RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 GOLM1Q8NBJ4 401 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 OR4F6Q8NGB9 312 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 UHMK1Q8TAS1 419 aaKnown RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 SLC2A12Q8TD20 617 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 CHTF18Q8WVB6 975 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 TP53INP1Q96A56 240 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 L3HYPDHQ96EM0 354 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 C11orf24Q96F05 449 aaPredicted RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 FRMD6Q96NE9 622 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 NSUN5Q96P11 429 aaKnown RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 DGAT2Q96PD7 388 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 RASL10BQ96S79 203 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 ZNF382Q96SR6 550 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 RHOXF2Q9BQY4 288 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS50-218ENST00000485994 SEC14L3Q9UDX4 400 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 PLEKHB1Q9UF11 243 aaPredicted RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 CES1P1Q9UKY3 287 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 GRID1Q9ULK0 1009 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 OSGIN2Q9Y236 505 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 CACNA1CQ13936 2221 aa6.5□□□□□ -1.37
VPS50-218ENST00000485994 PHF3Q92576 2039 aaKnown RBP6.5□□□□□ -1.37
VPS50-218ENST00000485994 CREBBPQ92793 2442 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CRYBG3Q68DQ2 2970 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CELSR2Q9HCU4 2923 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 A0A1B0GTL3 188 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 C1orf226A1L170 272 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 CCDC151A5D8V7 595 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 A8MVJ9 347 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 C17orf105B2RV13 164 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 SAP18O00422 153 aaKnown RBP6.49□□□□□ -1.37
VPS50-218ENST00000485994 PPP6CO00743 305 aa6.49□□□□□ -1.37
VPS50-218ENST00000485994 PGRMC2O15173 223 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms