RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 GUCY1B2O75343 617 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 CSO75390 466 aaKnown RBP10.66□□□□□ -0.7
SND1-212ENST00000485871 MT-CO3P00414 261 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 C8BP07358 591 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 NR2F6P10588 404 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 CDK4P11802 303 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 HSD17B1P14061 328 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 CPN2P22792 545 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 RORAP35398 523 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 ETV5P41161 510 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 CDKN2CP42773 168 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 MAT1AQ00266 395 aaKnown RBP10.66□□□□□ -0.7
SND1-212ENST00000485871 DUSP2Q05923 314 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 IL11RAQ14626 422 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 SYT16Q17RD7 645 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 PGS1Q32NB8 556 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 LRIF1Q5T3J3 769 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 CPTPQ5TA50 214 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 PWWP2BQ6NUJ5 590 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 TTLL10Q6ZVT0 673 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 COX15Q7KZN9 410 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 APLFQ8IW19 511 aaPredicted RBP10.66□□□□□ -0.7
SND1-212ENST00000485871 MSRB3Q8IXL7 192 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 CLECL1Q8IZS7 167 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 CACTIN-AS1Q8N1I8 211 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 DNAJB8Q8NHS0 232 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.66□□□□□ -0.7
SND1-212ENST00000485871 GATA6Q92908 595 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 POP5Q969H6 163 aaKnown RBP10.66□□□□□ -0.7
SND1-212ENST00000485871 PMEPA1Q969W9 287 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 CIDECQ96AQ7 238 aaPredicted RBP10.66□□□□□ -0.7
SND1-212ENST00000485871 CCDC115Q96NT0 180 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 GBP5Q96PP8 586 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 OR52E6Q96RD3 313 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 GPATCH1Q9BRR8 931 aaKnown RBP10.66□□□□□ -0.7
SND1-212ENST00000485871 INPP5KQ9BT40 448 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 FAIM2Q9BWQ8 316 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 TMEM121BQ9BXQ6 578 aaPredicted RBP10.66□□□□□ -0.7
SND1-212ENST00000485871 KLHL4Q9C0H6 718 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 PAIP1Q9H074 479 aaKnown RBP10.66□□□□□ -0.7
SND1-212ENST00000485871 VCXQ9H320 206 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 SLC22A11Q9NSA0 550 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 SLC6A13Q9NSD5 602 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 SH3BP4Q9P0V3 963 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 SLAMF8Q9P0V8 285 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 CD300AQ9UGN4 299 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 BTNL2Q9UIR0 455 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 SRPK3Q9UPE1 567 aa10.66□□□□□ -0.7
SND1-212ENST00000485871 PMS2P1A4D2B8 440 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 GLOD5A6NK44 160 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 MYO1GB0I1T2 1018 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 FAM227AF5H4B4 570 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 TMX2-CTNND1H3BSU7 103 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 AGRPO00253 132 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 ACOT8O14734 319 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 ZIC2O95409 532 aaPredicted RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 FTH1P19P0C7X4 201 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 CEACAM1P13688 526 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 ITIH1P19827 911 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 BUD31P41223 144 aaPredicted RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 OR1D4P47884 311 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 AVPR1BP47901 424 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 HSPA13P48723 471 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 ALDH9A1P49189 494 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 CLCN2P51788 898 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 SKP1P63208 163 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 MRPS35P82673 323 aaKnown RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 DSG2Q14126 1118 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 MAP7Q14244 749 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 MLC1Q15049 377 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 MAPKAPK3Q16644 382 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 GTDC1Q4AE62 458 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
SND1-212ENST00000485871 CCDC157Q569K6 752 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 HES3Q5TGS1 186 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 OR52E8Q6IFG1 317 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 GPR155Q7Z3F1 870 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 ANKRD46Q86W74 232 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 PPP1R3BQ86XI6 285 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 PQLC1Q8N2U9 271 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 METTL27Q8N6F8 245 aaPredicted RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 NATD1Q8N6N6 113 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 BHLHE22Q8NFJ8 381 aaPredicted RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 GOT1L1Q8NHS2 421 aaPredicted RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 SUN3Q8TAQ9 357 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 NRG4Q8WWG1 115 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 PYDC1Q8WXC3 89 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 LRRC58Q96CX6 371 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 MMABQ96EY8 250 aaPredicted RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 CNRIP1Q96F85 164 aaPredicted RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 LRGUKQ96M69 825 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 ZNF570Q96NI8 536 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 PHF12Q96QT6 1004 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 NR1H4Q96RI1 486 aaPredicted RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 PRPF18Q99633 342 aaKnown RBP10.65□□□□□ -0.7
SND1-212ENST00000485871 CMKLR1Q99788 373 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 NDC1Q9BTX1 674 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 MIEF1Q9NQG6 463 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 SLC35C2Q9NQQ7 365 aa10.65□□□□□ -0.7
SND1-212ENST00000485871 ATAD3AQ9NVI7 634 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms