RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 COLEC12Q5KU26 742 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 B3GNTL1Q67FW5 361 aaPredicted RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 FCRLBQ6BAA4 426 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 FAM180BQ6P0A1 224 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 PTRH1Q86Y79 214 aaKnown RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 KIRREL3Q8IZU9 778 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 NFAM1Q8NET5 270 aaPredicted RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 B3GNT7Q8NFL0 401 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 OR4K14Q8NGD5 310 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 OR14A16Q8NHC5 309 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 CLHC1Q8NHS4 586 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 FAM76AQ8TAV0 307 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 ZNF75CPQ92670 426 aaPredicted RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 DAZLQ92904 295 aaKnown RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 NCLNQ969V3 563 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 EXOSC8Q96B26 276 aaKnown RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 KLHL29Q96CT2 875 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 TUBGCP3Q96CW5 907 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 C11orf24Q96F05 449 aaPredicted RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 RBM18Q96H35 190 aaKnown RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 PPP3R2Q96LZ3 170 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 SMAD5Q99717 465 aaKnown RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 PELOQ9BRX2 385 aaKnown RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 C1orf50Q9BV19 199 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 OR8D2Q9GZM6 311 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 EPS8L2Q9H6S3 715 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 MMP25Q9NPA2 562 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 MYNNQ9NPC7 610 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 INTS9Q9NV88 658 aaKnown RBP11.06□□□□□ -0.64
HPS4-214ENST00000485842 THAP1Q9NVV9 213 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 VTI1BQ9UEU0 232 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 ATMQ13315 3056 aa11.06□□□□□ -0.64
HPS4-214ENST00000485842 NPIPB8E9PQR5 432 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 DYRK3O43781 588 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 DPM1O60762 260 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 KITP10721 976 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 CPMP14384 443 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 SOX11P35716 441 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 FEN1P39748 380 aaKnown RBP11.05□□□□□ -0.64
HPS4-214ENST00000485842 GSTM5P46439 218 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 CLCN2P51788 898 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 XKP51811 444 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 OCRLQ01968 901 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 C2orf80Q0P641 193 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 HEPACAMQ14CZ8 416 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 ATP6AP1LQ52LC2 224 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 RFTN2Q52LD8 501 aaPredicted RBP11.05□□□□□ -0.64
HPS4-214ENST00000485842 HSP90B2PQ58FF3 399 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 CRB2Q5IJ48 1285 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 C6orf163Q5TEZ5 329 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 CROCCQ5TZA2 2017 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 JMJD6Q6NYC1 403 aaPredicted RBP11.05□□□□□ -0.64
HPS4-214ENST00000485842 ISLR2Q6UXK2 745 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 DGAT2L6Q6ZPD8 337 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 CRLF3Q8IUI8 442 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 CPAMD8Q8IZJ3 1885 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 ST13P4Q8IZP2 240 aaPredicted RBP11.05□□□□□ -0.64
HPS4-214ENST00000485842 FNDC5Q8NAU1 212 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 C7orf57Q8NEG2 295 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 SLC2A12Q8TD20 617 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 LRRC8CQ8TDW0 803 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 ELP5Q8TE02 316 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 PTPMT1Q8WUK0 201 aaPredicted RBP11.05□□□□□ -0.64
HPS4-214ENST00000485842 PSMF1Q92530 271 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 GFM2Q969S9 779 aaKnown RBP11.05□□□□□ -0.64
HPS4-214ENST00000485842 VMP1Q96GC9 406 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 METTL2AQ96IZ6 378 aaKnown RBP11.05□□□□□ -0.64
HPS4-214ENST00000485842 TSSK3Q96PN8 268 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 CCT7Q99832 543 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 CNPPD1Q9BV87 410 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 MFRPQ9BY79 579 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 DEFB126Q9BYW3 111 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 NUF2Q9BZD4 464 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 ZBTB20Q9HC78 741 aaPredicted RBP11.05□□□□□ -0.64
HPS4-214ENST00000485842 MIEF1Q9NQG6 463 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 HAO1Q9UJM8 370 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 UTS2RQ9UKP6 389 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 CES1P1Q9UKY3 287 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 PSME2Q9UL46 239 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 TMED5Q9Y3A6 229 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 PCDHGB7Q9Y5F8 929 aa11.05□□□□□ -0.64
HPS4-214ENST00000485842 AKAP10O43572 662 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 LRATO95237 230 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 DDAH2O95865 285 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 F10P00742 488 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 SLC35E2P0CK97 266 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 DRD2P14416 443 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 PORP16435 677 aaPredicted RBP11.04□□□□□ -0.64
HPS4-214ENST00000485842 SDC1P18827 310 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 DDCP20711 480 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 NT5EP21589 574 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 TACR1P25103 407 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 MAPK1P28482 360 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 PTGER1P34995 402 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 ST13P50502 369 aaKnown RBP11.04□□□□□ -0.64
HPS4-214ENST00000485842 HK2P52789 917 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 ERVK-8P63133 956 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 BIKQ13323 160 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 MFAP5Q13361 173 aa11.04□□□□□ -0.64
HPS4-214ENST00000485842 ZNF267Q14586 743 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms