RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 ALDH3A2P51648 485 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 MAPK12P53778 367 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 CSNK2BP67870 215 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 KLC1Q07866 573 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 EFTUD2Q15029 972 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 ALX1Q15699 326 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 ZNF74Q16587 644 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 PHKG1Q16816 387 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 MOGAT2Q3SYC2 334 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 TWF2Q6IBS0 349 aaKnown RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 MZT2BQ6NZ67 158 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 ZNF343Q6P1L6 599 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 FUT10Q6P4F1 479 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 FAM198BQ6UWH4 519 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 GPRIN3Q6ZVF9 776 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 PLPPR4Q7Z2D5 763 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 LMNTD2Q8IXW0 634 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 Q8NBF4 154 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 TSPAN14Q8NG11 270 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 DNASE1L2Q92874 299 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 ELSPBP1Q96BH3 223 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 ARSGQ96EG1 525 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 PRICKLE1Q96MT3 831 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 NKX3-1Q99801 234 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 TRIM4Q9C037 500 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 MAF1Q9H063 256 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 GOLPH3LQ9H4A5 285 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 CLMPQ9H6B4 373 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 AZI2Q9H6S1 392 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 MINDY3Q9H8M7 445 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 MED20Q9H944 212 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 MYNNQ9NPC7 610 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 CCDC177Q9NQR7 707 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 PRMT7Q9NVM4 692 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 GTSE1Q9NYZ3 720 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 CPSF2Q9P2I0 782 aaKnown RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 CHORDC1Q9UHD1 332 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 DDX25Q9UHL0 483 aaKnown RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 PIN4Q9Y237 131 aaKnown RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 HES2Q9Y543 173 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 ZFP37Q9Y6Q3 630 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 TRIP11Q15643 1979 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 COL1A2P08123 1366 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 A0A087WV48 116 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 A0A1W2PPQ1 181 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 SPECC1L-ADORA2AF8WAN1 911 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 SRSF10O75494 262 aaKnown RBP3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 BEST1O76090 585 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 PGM3O95394 542 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 CD59P13987 128 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 RBMS1P29558 406 aaKnown RBP3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 HOXA6P31267 233 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 PTGER4P35408 488 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 TSFMP43897 325 aaKnown RBP3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 CSRP3P50461 194 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 TMEM50BP56557 158 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 CLDN6P56747 220 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 RIGQ13278 110 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 PPM1LQ5SGD2 360 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 SPATA1Q5VX52 437 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 CATSPERDQ86XM0 798 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 CDC20BQ86Y33 519 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 LGI2Q8N0V4 545 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 SYT2Q8N9I0 419 aaPredicted RBP3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 C4orf45Q96LM5 186 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 FOXN4Q96NZ1 517 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 DGAT2Q96PD7 388 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 ABHD1Q96SE0 405 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 TMEM175Q9BSA9 504 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 LRRCC1Q9C099 1032 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 CCDC68Q9H2F9 335 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 PRORYQ9H606 182 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 ANKZF1Q9H8Y5 726 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 ZNF302Q9NR11 478 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 IL17BQ9UHF5 180 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 SNX8Q9Y5X2 465 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 CSNK1G3Q9Y6M4 447 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 KNTC1P50748 2209 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 NUP210Q8TEM1 1887 aaPredicted RBP3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 NF1P21359 2839 aa3.79□□□□□ -1.8
SMARCC1-207ENST00000485833 ICE1Q9Y2F5 2266 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 NFASCO94856 1347 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 MYBPHLA2RUH7 354 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 ARL5CA6NH57 179 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 H0YAE9 185 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 I3L4J1 428 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 SH3BP5O60239 455 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 PLEKHA8P1O95397 391 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 IGHEP01854 428 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 GP1BBP13224 206 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 PSMC3P17980 439 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 ACTN2P35609 894 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 PTGER3P43115 390 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 LMAN1P49257 510 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 PSMD5Q16401 504 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 MCMDC2Q4G0Z9 681 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 LIN9Q5TKA1 542 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 LEKR1Q6ZMV7 388 aa3.78□□□□□ -1.8
SMARCC1-207ENST00000485833 SH2D6Q7Z4S9 175 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms