RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 TNFSF10P50591 281 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 NEK2P51955 445 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 CDH13P55290 713 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 SLC26A5P58743 744 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 AP2B1P63010 937 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 BTN3A2P78410 334 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 CLCQ05315 142 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 TBL3Q12788 808 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 BIKQ13323 160 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 MFAP5Q13361 173 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 MPP2Q14168 576 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 PCLAFQ15004 111 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ABRAXAS2Q15018 415 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ZRSR2Q15696 482 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 NSDHLQ15738 373 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 EXT1Q16394 746 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 HIST2H2ACQ16777 129 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 CCDC153Q494R4 210 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 RPS26P11Q5JNZ5 115 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 AGAP7PQ5VUJ5 663 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 FRG2Q64ET8 278 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 SLC6A19Q695T7 634 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 HIST2H2AA3Q6FI13 130 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 OR4C11Q6IEV9 310 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 TRIM40Q6P9F5 258 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ISLR2Q6UXK2 745 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 C16orf47Q6ZP98 133 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 CUZD1Q86UP6 607 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 SLC22A9Q8IVM8 553 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 CHERPQ8IWX8 916 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 KBTBD2Q8IY47 623 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 SNX31Q8N9S9 440 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 C7orf57Q8NEG2 295 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 OR4F6Q8NGB9 312 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 RDH11Q8TC12 318 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ADAMTS18Q8TE60 1221 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 DOK4Q8TEW6 326 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 PTPMT1Q8WUK0 201 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 RGMAQ96B86 450 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ANKRD9Q96BM1 317 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 PHF21BQ96EK2 531 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 C19orf60Q96EN9 201 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 MAGEB10Q96LZ2 347 aaPredicted RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 AGAP4Q96P64 663 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 FRG2BQ96QU4 278 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 MAPKAP1Q9BPZ7 522 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 CCDC77Q9BR77 488 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 HES7Q9BYE0 225 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 ROGDIQ9GZN7 287 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 NOL11Q9H8H0 719 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 ZNF160Q9HCG1 818 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 CPSF2Q9P2I0 782 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 SLC17A7Q9P2U7 560 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 CES1P1Q9UKY3 287 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 EXO1Q9UQ84 846 aaKnown RBP5.34□□□□□ -1.55
CUX1-208ENST00000485792 B3GNT3Q9Y2A9 372 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 PLLPQ9Y342 182 aa5.34□□□□□ -1.55
CUX1-208ENST00000485792 A0A088AWK7 358 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 A0A0G2JMM0 328 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 A0A1W2PPB8 328 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 A0A1W2PR48 441 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 A0A1W2PRS3 328 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 SAGE2PA6NJ88 616 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 KIR3DP1A8MWS1 328 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 H3BQF6 201 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 J3QKU1 62 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 ZNHIT1O43257 154 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 B3GALT2O43825 422 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 SMIM24O75264 130 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 GLRA3O75311 464 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 SEC24DO94855 1032 aaPredicted RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 ESRRBO95718 433 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 DDAH2O95865 285 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 OTCP00480 354 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 F10P00742 488 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 TGFB1P01137 390 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 JUNP05412 331 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 FGF4P08620 206 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 DHRS4L1P0CG22 281 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 HSD3B1P14060 373 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 KRT4P19013 534 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 ZNF10P21506 573 aaPredicted RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 PRPH2P23942 346 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 HSD3B2P26439 372 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 CCT5P48643 541 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 PLA2G16P53816 162 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 PKNOX1P55347 436 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 RPS13P62277 151 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 RAE1P78406 368 aaKnown RBP5.33□□□□□ -1.56
CUX1-208ENST00000485792 TLE1Q04724 770 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 ZNF844Q08AG5 666 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 LCP2Q13094 533 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 KIAA0040Q15053 153 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 CEBPEQ15744 281 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 IGFBP7Q16270 282 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 CPSF6Q16630 551 aaKnown RBP eCLIP5.33□□□□□ -1.56
CUX1-208ENST00000485792 ZNF750Q32MQ0 723 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 UGT3A2Q3SY77 523 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 SFT2D3Q587I9 215 aa5.33□□□□□ -1.56
CUX1-208ENST00000485792 FCRLBQ6BAA4 426 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms