RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 OLFM4Q6UX06 510 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 DLEU7Q6UYE1 221 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 SIGLEC15Q6ZMC9 328 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 FAM43BQ6ZT52 329 aaPredicted RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 C15orf52Q6ZUT6 534 aaKnown RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 COX8CQ7Z4L0 72 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 TAF8Q7Z7C8 310 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 NLRP14Q86W24 1093 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 ELMOD2Q8IZ81 293 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 CCNYQ8ND76 341 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 GANCQ8TET4 914 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 HAS2Q92819 552 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 DTD2Q96FN9 168 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 RBM41Q96IZ5 413 aaKnown RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 FAM218AQ96MZ4 157 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 IL12RB2Q99665 862 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 SPAG8Q99932 426 aaPredicted RBP3.22□□□□□ -1.89
SMC4-215ENST00000484799 SLC39A8Q9C0K1 460 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 TRPV6Q9H1D0 765 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 SP140LQ9H930 580 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 MARCH7Q9H992 704 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 POLE3Q9NRF9 147 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 HOMER3Q9NSC5 361 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 PIGVQ9NUD9 493 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 CLIP2Q9UDT6 1046 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 DNPEPQ9ULA0 475 aa3.22□□□□□ -1.89
SMC4-215ENST00000484799 A0A087WWV3 80 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 SLC15A5A6NIM6 579 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 NKX6-3A6NJ46 265 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 TCP10L2B9ZVM9 353 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 E5RGE8 158 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 TLR4O00206 839 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 CHEK1O14757 476 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 CXCL14O95715 111 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 CXCL10P02778 98 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 ANPEPP15144 967 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 UGT1A6P19224 532 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 GPR183P32249 361 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 HPDP32754 393 aaPredicted RBP3.21□□□□□ -1.9
SMC4-215ENST00000484799 KIF5BP33176 963 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 DUTP33316 252 aaKnown RBP3.21□□□□□ -1.9
SMC4-215ENST00000484799 CNN1P51911 297 aaKnown RBP3.21□□□□□ -1.9
SMC4-215ENST00000484799 HNRNPFP52597 415 aaKnown RBP3.21□□□□□ -1.9
SMC4-215ENST00000484799 NDUFV3P56181 108 aaKnown RBP3.21□□□□□ -1.9
SMC4-215ENST00000484799 SRPXP78539 464 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 CCZ1BP86790 482 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 CCZ1P86791 482 aaPredicted RBP3.21□□□□□ -1.9
SMC4-215ENST00000484799 GABPAQ06546 454 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 STX1AQ16623 288 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 DUSP5Q16690 384 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 CYP4V2Q6ZWL3 525 aaPredicted RBP3.21□□□□□ -1.9
SMC4-215ENST00000484799 CCDC185Q8N715 623 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 C4orf32Q8N8J7 132 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 LRTM2Q8N967 370 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 KLHL30-AS1Q8NEE0 82 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 TMEM185AQ8NFB2 350 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 OR52E1Q8NGJ3 308 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 CCDC110Q8TBZ0 833 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 AGAP11Q8TF27 550 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.21□□□□□ -1.9
SMC4-215ENST00000484799 SEPT8Q92599 483 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 FAM46BQ96A09 425 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 STRADBQ9C0K7 418 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 C5orf66Q9H5L9 145 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 KCNMB3Q9NPA1 279 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 ACOXLQ9NUZ1 547 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 NCKAP1Q9Y2A7 1128 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 PLEKHA6Q9Y2H5 1048 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 NSG2Q9Y328 171 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 SH3GLB1Q9Y371 365 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 MRPS2Q9Y399 296 aaKnown RBP3.21□□□□□ -1.9
SMC4-215ENST00000484799 COLEC10Q9Y6Z7 277 aa3.21□□□□□ -1.9
SMC4-215ENST00000484799 UBE4BO95155 1302 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 UMODL1Q5DID0 1318 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 hCG_38984A0A1B0GV85 526 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 MACROD2A1Z1Q3 448 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 E9PAM4 449 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 PSMD3O43242 534 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 SYT7O43581 403 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 NME2P1O60361 137 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 NXPH4O95158 308 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 OR6A2O95222 327 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 GOT1P17174 413 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 BCL3P20749 454 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 GIFP27352 417 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 MARCKSP29966 332 aaPredicted RBP3.2□□□□□ -1.9
SMC4-215ENST00000484799 SRD5A2P31213 254 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 DRD3P35462 400 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 SLC1A3P43003 542 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 ALDH3B1P43353 468 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 RABIFP47224 123 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 ATP4BP51164 291 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 SRP54P61011 504 aaKnown RBP3.2□□□□□ -1.9
SMC4-215ENST00000484799 LYZP61626 148 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 SRSF9Q13242 221 aaKnown RBP eCLIP3.2□□□□□ -1.9
SMC4-215ENST00000484799 DPYSQ14117 519 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 GRB14Q14449 540 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 FAM106AQ4KMX7 169 aa3.2□□□□□ -1.9
SMC4-215ENST00000484799 HERC4Q5GLZ8 1057 aaPredicted RBP3.2□□□□□ -1.9
SMC4-215ENST00000484799 ZNF776Q68DI1 518 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms