RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 REXO4Q9GZR2 422 aaKnown RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 UBQLN3Q9H347 655 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 PRDM7Q9NQW5 492 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 SLC17A6Q9P2U8 582 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 TESMINQ9Y4I5 508 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 WIF1Q9Y5W5 379 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 MAD1L1Q9Y6D9 718 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 KCNE2Q9Y6J6 123 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 ANK2Q01484 3957 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 DSCAMO60469 2012 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 A0A088AWK7 358 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 AHSGP02765 367 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 ENO2P09104 434 aaPredicted RBP9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 C1GALT1C1LP0DN25 315 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 ZNF10P21506 573 aaPredicted RBP9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 GDF5P43026 501 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 CPA2P48052 419 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 CDK9P50750 372 aaKnown RBP9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 SARNPP82979 210 aaKnown RBP9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 TBL3Q12788 808 aaKnown RBP9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 SERTAD2Q14140 314 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 EIPR1Q53HC9 387 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 HMBOX1Q6NT76 420 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 TRIM40Q6P9F5 258 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 ZNF793Q6ZN11 406 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 SLC15A4Q8N697 577 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 GABPB2Q8TAK5 448 aaPredicted RBP9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 DIO2Q92813 273 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 SIGLEC10Q96LC7 697 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 SERPINB12Q96P63 405 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 GNRHR2Q96P88 292 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 HS3ST6Q96QI5 342 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 F2RL3Q96RI0 385 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 GAL3ST4Q96RP7 486 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 FAM167BQ9BTA0 163 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 TRIM5Q9C035 493 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 CALHM2Q9HA72 323 aa9.93□□□□□ -0.82
SMARCC1-205ENST00000483847 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 SYNDIG1LA6NDD5 238 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 CDC7O00311 574 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 RTCAO00442 366 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 CTIFO43310 598 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 FGF17O60258 216 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 PRAMEF4O60810 478 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 CLEC3AO75596 197 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 MLNP12872 115 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 GNAZP19086 355 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 FPR1P21462 350 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 SERPINB3P29508 390 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 MSH2P43246 934 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 MAGEA3P43357 314 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 STT3AP46977 705 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 PTH2RP49190 550 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 NAGLUP54802 743 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 IGLV3-21P80748 117 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 CAPRIN1Q14444 709 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 SF3B4Q15427 424 aaKnown RBP eCLIP9.92□□□□□ -0.821e-6■■■■□ 19.3
SMARCC1-205ENST00000483847 NTRK2Q16620 822 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 NHSL2Q5HYW2 709 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 WIPI1Q5MNZ9 446 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 PRAMEF9Q5VWM5 478 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 UBE3DQ7Z6J8 389 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 GCNT2Q8N0V5 402 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 INTS12Q96CB8 462 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 PIK3IP1Q96FE7 263 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 RILPQ96NA2 401 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 WFIKKN1Q96NZ8 548 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 TUBA1CQ9BQE3 449 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 GSX2Q9BZM3 304 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 COPS7BQ9H9Q2 264 aaPredicted RBP9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 XAB2Q9HCS7 855 aaKnown RBP9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 KLHL28Q9NXS3 571 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 NDRG3Q9UGV2 375 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 C15orf41Q9Y2V0 281 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 HEATR5AQ86XA9 2040 aa9.92□□□□□ -0.82
SMARCC1-205ENST00000483847 MED12LQ86YW9 2145 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 ANKRD33BA6NCL7 494 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 NPEPPSL1A6NEC2 478 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 A8MXE2 369 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 SNPHO15079 494 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 H2AFYO75367 372 aaKnown RBP9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 WDR47O94967 919 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 FGGP02679 453 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 CCDC175P0C221 793 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 CPOXP36551 454 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 NR1H2P55055 460 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 FBXW4P57775 412 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 FAM27E3Q08E93 113 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 RCAN2Q14206 197 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 RCN2Q14257 317 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 TOMM20Q15388 145 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 TMEM139Q8IV31 216 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 MAPK1IP1LQ8NDC0 245 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 MCUQ8NE86 351 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 TTLQ8NG68 377 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 ZPLD1Q8TCW7 415 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 ABTB1Q969K4 478 aaPredicted RBP9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 FBXL20Q96IG2 436 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 DGAT2Q96PD7 388 aa9.91□□□□□ -0.82
SMARCC1-205ENST00000483847 EGFL8Q99944 293 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms