RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 NAE1Q13564 534 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 DEFB134Q4QY38 66 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 MBNL2Q5VZF2 373 aaKnown RBP5.48□□□□□ -1.53
CSDE1-207ENST00000483407 VASNQ6EMK4 673 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 ARHGAP11AQ6P4F7 1023 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 LCTLQ6UWM7 567 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 C3P1Q6ZMU1 363 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 QSOX2Q6ZRP7 698 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 NCCRP1Q6ZVX7 275 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-207ENST00000483407 ABHD13Q7L211 337 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 PDSS2Q86YH6 399 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 TMEM139Q8IV31 216 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 DENND6AQ8IWF6 608 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 KIF2BQ8N4N8 673 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 TMEM156Q8N614 296 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 CPSF7Q8N684 471 aaKnown RBP5.48□□□□□ -1.53
CSDE1-207ENST00000483407 GPATCH11Q8N954 259 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 MFSD9Q8NBP5 474 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 OR5T3Q8NGG3 340 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 FAM57AQ8TBR7 257 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 ELP5Q8TE02 316 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 TSPEARQ8WU66 669 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 RND1Q92730 232 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 PMM1Q92871 262 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 TSLPQ969D9 159 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 LRGUKQ96M69 825 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 FAM167BQ9BTA0 163 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 SARGQ9BW04 601 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 BTBD2Q9BX70 525 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 TRIM54Q9BYV2 358 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 DEFB126Q9BYW3 111 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 ATG10Q9H0Y0 220 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 TRIM45Q9H8W5 580 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-207ENST00000483407 CLK4Q9HAZ1 481 aaKnown RBP5.48□□□□□ -1.53
CSDE1-207ENST00000483407 PARVBQ9HBI1 364 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 XAB2Q9HCS7 855 aaKnown RBP5.48□□□□□ -1.53
CSDE1-207ENST00000483407 LANCL2Q9NS86 450 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 C20orf96Q9NUD7 363 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-207ENST00000483407 TAS2R13Q9NYV9 303 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 FBXO5Q9UKT4 447 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 PDE10AQ9Y233 779 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 NEU2Q9Y3R4 380 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 MAD1L1Q9Y6D9 718 aa5.48□□□□□ -1.53
CSDE1-207ENST00000483407 SNRNP200O75643 2136 aaKnown RBP5.48□□□□□ -1.53
CSDE1-207ENST00000483407 APCP25054 2843 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 A0A1B0GTH9 108 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ZCWPW2A0A1B0GU75 182 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 TRBC2A0A5B9 178 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 SAGE2PA6NJ88 616 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ADAM10O14672 748 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 SLC16A5O15375 505 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ZNHIT1O43257 154 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CHST10O43529 356 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 PEX1O43933 1283 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 HS6ST1O60243 411 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CEP104O60308 925 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 KRT14P02533 472 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 TFEBP19484 476 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 APEX1P27695 318 aaKnown RBP5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CHRNB4P30926 498 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 PTGER1P34995 402 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 MAGEA6P43360 314 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CLCN2P51788 898 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 GP2P55259 537 aaKnown RBP5.47□□□□□ -1.53
CSDE1-207ENST00000483407 AP1S2P56377 157 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 OLR1P78380 273 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CSHL1Q14406 222 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 TRIP13Q15645 432 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-207ENST00000483407 KRTAP21-3Q3LHN1 58 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CES4AQ5XG92 561 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 DUPD1Q68J44 220 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ZNF549Q6P9A3 640 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CD300LDQ6UXZ3 194 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CAND1Q86VP6 1230 aaKnown RBP5.47□□□□□ -1.53
CSDE1-207ENST00000483407 TMEM200AQ86VY9 491 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CLYBLQ8N0X4 340 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CYP4Z2PQ8N1L4 340 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 PRR18Q8N4B5 295 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 DTX3Q8N9I9 347 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ACBD4Q8NC06 268 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ZNF740Q8NDX6 193 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 MCUQ8NE86 351 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ABHD11Q8NFV4 315 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 C16orf52Q8NHV5 167 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 EEF1AKMT1Q8WVE0 214 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ATL1Q8WXF7 558 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 SNF8Q96H20 258 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 SERPINB12Q96P63 405 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 TREX2Q9BQ50 279 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-207ENST00000483407 CCDC77Q9BR77 488 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ZNF559Q9BR84 538 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 SGPP1Q9BX95 441 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 OR10A5Q9H207 317 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 TP63Q9H3D4 680 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-207ENST00000483407 KCNJ16Q9NPI9 418 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 DLL4Q9NR61 685 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ARL15Q9NXU5 204 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 ZFP69BQ9UJL9 534 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 MED16Q9Y2X0 877 aa5.47□□□□□ -1.53
CSDE1-207ENST00000483407 PKDREJQ9NTG1 2253 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms