RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 AZIN1O14977 448 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 NPHS1O60500 1241 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 PRAMEF2O60811 474 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 CHEK2O96017 543 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 SLC35E2P0CK97 266 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 XKP51811 444 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 TRA2BP62995 288 aaKnown RBP17.12■□□□□ 0.33
SMIM4-204ENST00000482728 TUBA3CQ13748 450 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 TUBA3EQ6PEY2 450 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 EXOC3L1Q86VI1 746 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 PPP1R14CQ8TAE6 165 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 SLC2A12Q8TD20 617 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 RIT1Q92963 219 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 UCN3Q969E3 161 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 TM4SF18Q96CE8 201 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 C19orf60Q96EN9 201 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 PGM2Q96G03 612 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 SENP5Q96HI0 755 aaPredicted RBP17.12■□□□□ 0.33
SMIM4-204ENST00000482728 ART5Q96L15 291 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 STMN4Q9H169 189 aaPredicted RBP17.12■□□□□ 0.33
SMIM4-204ENST00000482728 KCNK9Q9NPC2 374 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 MCM8Q9UJA3 840 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 PCDHA9Q9Y5H5 950 aa17.12■□□□□ 0.33
SMIM4-204ENST00000482728 ESPL1Q14674 2120 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 PCDH7O60245 1069 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 DDAH2O95865 285 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 BPGMP07738 259 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 CD46P15529 392 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 ALDH9A1P49189 494 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 CYB561P49447 251 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 ST13P50502 369 aaKnown RBP17.11■□□□□ 0.33
SMIM4-204ENST00000482728 OR1C1Q15619 314 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 ZNF766Q5HY98 468 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 BEND6Q5SZJ8 279 aaPredicted RBP17.11■□□□□ 0.33
SMIM4-204ENST00000482728 CLEC6AQ6EIG7 209 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 RPUSD3Q6P087 351 aaKnown RBP17.11■□□□□ 0.33
SMIM4-204ENST00000482728 TRIM46Q7Z4K8 759 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 NUDCD3Q8IVD9 361 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 TMEM156Q8N614 296 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 GALNT11Q8NCW6 608 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 OR5L2Q8NGL0 311 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 APIPQ96GX9 242 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 C5orf34Q96MH7 638 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 SSU72Q9NP77 194 aaKnown RBP17.11■□□□□ 0.33
SMIM4-204ENST00000482728 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMIM4-204ENST00000482728 LRFN1Q9P244 771 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 ZNF223Q9UK11 482 aaPredicted RBP17.11■□□□□ 0.33
SMIM4-204ENST00000482728 FIS1Q9Y3D6 152 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 CROCCQ5TZA2 2017 aa17.11■□□□□ 0.33
SMIM4-204ENST00000482728 GOLGA6L10A6NI86 522 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 ITGA10O75578 1167 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 ANXA4P09525 319 aaPredicted RBP17.1■□□□□ 0.33
SMIM4-204ENST00000482728 HLCSP50747 726 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 ZNF267Q14586 743 aaPredicted RBP17.1■□□□□ 0.33
SMIM4-204ENST00000482728 ARL13AQ5H913 290 aaPredicted RBP17.1■□□□□ 0.33
SMIM4-204ENST00000482728 SPINK14Q6IE38 97 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 FAM180AQ6UWF9 173 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 ZCCHC23Q6ZST2 131 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 ARMC10Q8N2F6 343 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 GRHL3Q8TE85 626 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 FBXL20Q96IG2 436 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 CNPPD1Q9BV87 410 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 CLMPQ9H6B4 373 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 TNFRSF12AQ9NP84 129 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 DLGAP4Q9Y2H0 992 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 YARS2Q9Y2Z4 477 aaKnown RBP17.1■□□□□ 0.33
SMIM4-204ENST00000482728 ACTL7BQ9Y614 415 aa17.1■□□□□ 0.33
SMIM4-204ENST00000482728 SHANK1Q9Y566 2161 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 SLC28A1O00337 649 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 TM9SF1O15321 606 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 RGS14O43566 566 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 ERAL1O75616 437 aaKnown RBP17.09■□□□□ 0.33
SMIM4-204ENST00000482728 FGF4P08620 206 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 CPMP14384 443 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 DRD2P14416 443 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 PORP16435 677 aaPredicted RBP17.09■□□□□ 0.33
SMIM4-204ENST00000482728 TIA1P31483 386 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMIM4-204ENST00000482728 GALNSP34059 522 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 SERPINB5P36952 375 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 SERPINB4P48594 390 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 SSR4P51571 173 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 RNF4P78317 190 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 RAE1P78406 368 aaKnown RBP17.09■□□□□ 0.33
SMIM4-204ENST00000482728 C6orf163Q5TEZ5 329 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 SLC48A1Q6P1K1 146 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 GALNT18Q6P9A2 607 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 DGAT2L6Q6ZPD8 337 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 CLYBLQ8N0X4 340 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 ZNF321PQ8N8H1 164 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 OR8K3Q8NH51 312 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 DOK4Q8TEW6 326 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 ZNF721Q8TF20 911 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 TMEM125Q96AQ2 219 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 SIGLEC12Q96PQ1 595 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 KLHL1Q9NR64 748 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 MYOTQ9UBF9 498 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 NTNG1Q9Y2I2 539 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 TRAF6Q9Y4K3 522 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 ZNF780BQ9Y6R6 833 aa17.09■□□□□ 0.33
SMIM4-204ENST00000482728 WDR91A4D1P6 747 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms