RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 GOLGA8RI6L899 631 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 ACOT7O00154 380 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 STX16O14662 325 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 PRRG2O14669 202 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 PROM1O43490 865 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 DYRK3O43781 588 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 KLK1P06870 262 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 RPS17P08708 135 aaKnown RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 SBK3P0C264 359 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 FAM153BP0C7A2 387 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 HTR1EP28566 365 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 GCAP28676 217 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 PPIAP62937 165 aaKnown RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 CUL3Q13618 768 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 ZNF267Q14586 743 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 NCOA6Q14686 2063 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 FAM153CQ494X1 144 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 GLE1Q53GS7 698 aaKnown RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 TCHHL1Q5QJ38 904 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 PRAMEF20Q5VT98 475 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 FRG2Q64ET8 278 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 SP5Q6BEB4 398 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 MRM1Q6IN84 353 aaKnown RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 LETMD1Q6P1Q0 360 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 MTFR2Q6P444 385 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 RPTNQ6XPR3 784 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 BNC2Q6ZN30 1099 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 RTL4Q6ZR62 310 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 FAM47EQ6ZV65 393 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 DOLPP1Q86YN1 238 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 GPALPP1Q8IXQ4 340 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 SRRM1Q8IYB3 904 aaKnown RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 MMP21Q8N119 569 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 ZFP62Q8NB50 900 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 OR5M3Q8NGP4 307 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 KIF18AQ8NI77 898 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 TANKQ92844 425 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 RBM18Q96H35 190 aaKnown RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 SENP5Q96HI0 755 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 FBXL20Q96IG2 436 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 FRG2BQ96QU4 278 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 MRPL57Q9BQC6 102 aaKnown RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 TTTY12Q9BZ98 90 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 DDX31Q9H8H2 851 aaKnown RBP9.69□□□□□ -0.86
CPSF4-212ENST00000482251 TNFRSF10DQ9UBN6 386 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 ZNF180Q9UJW8 692 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 PPT2Q9UMR5 302 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 ENTPD4Q9Y227 616 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 TSC22D4Q9Y3Q8 395 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 ASB4Q9Y574 426 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 CELSR2Q9HCU4 2923 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 EML6Q6ZMW3 1958 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 C19orf84I3L1E1 186 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 FOXE1O00358 373 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-212ENST00000482251 CDK2AP1O14519 115 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 PGRMC2O15173 223 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 RIPK2O43353 540 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 HNRNPRO43390 633 aaKnown RBP9.68□□□□□ -0.86
CPSF4-212ENST00000482251 OR4F21O95013 312 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 GPR75O95800 540 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 IGKV3-11P04433 115 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 SNRPAP09012 282 aaKnown RBP9.68□□□□□ -0.86
CPSF4-212ENST00000482251 CELA3AP09093 270 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 CNTFP26441 200 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 SSTR4P31391 388 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 PTGS2P35354 604 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 PIGAP37287 484 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 MAGEA5P43359 124 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 SMSP52788 366 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 IFT88Q13099 833 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 ART3Q13508 389 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 OR52E8Q6IFG1 317 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 RNF111Q6ZNA4 994 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 GK5Q6ZS86 529 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 SLC29A4Q7RTT9 530 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 MILR1Q7Z6M3 343 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 MCEMP1Q8IX19 187 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 ST13P4Q8IZP2 240 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-212ENST00000482251 RPRMLQ8N4K4 120 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 CEP112Q8N8E3 955 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 FAM13CQ8NE31 585 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 OR5L2Q8NGL0 311 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 OR8K3Q8NH51 312 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 C16orf52Q8NHV5 167 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 FAM57AQ8TBR7 257 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 SLC22A8Q8TCC7 542 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 TRPC4APQ8TEL6 797 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 ZNF483Q8TF39 744 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-212ENST00000482251 RIT1Q92963 219 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 ART5Q96L15 291 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 SERPINI1Q99574 410 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 NTMT1Q9BV86 223 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 ELOVL6Q9H5J4 265 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 WDR41Q9HAD4 459 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 TMEM216Q9P0N5 145 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 TMCO1Q9UM00 188 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 SLC12A4Q9UP95 1085 aa9.68□□□□□ -0.86
CPSF4-212ENST00000482251 PCNX1Q96RV3 2341 aa9.67□□□□□ -0.86
CPSF4-212ENST00000482251 IQANK1A0A1B0GTG1 560 aa9.67□□□□□ -0.86
CPSF4-212ENST00000482251 ATP6AP2A0A1C7CYW4 349 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms