RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 FOXO6A8MYZ6 492 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 G3V2L1 256 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 KLRC4-KLRK1H3BQV0 150 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 WWP2O00308 870 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 LRRTM2O43300 516 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 ZNF500O60304 480 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 ULK1O75385 1050 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 PROCP04070 461 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 ENO1P06733 434 aaKnown RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 SLC35E2P0CK97 266 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 ZNF24P17028 368 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 KRT4P19013 534 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 PIK3R1P27986 724 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 HMOX2P30519 316 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 GALNSP34059 522 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 CRHR1P34998 444 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 PKNOX1P55347 436 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 NAA20P61599 178 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 VSNL1P62760 191 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 SRSF11Q05519 484 aaKnown RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 RBPJQ06330 500 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 GALNT1Q10472 559 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 TBL3Q12788 808 aaKnown RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 CSTF3Q12996 717 aaKnown RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 SPRED3Q2MJR0 410 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 NDUFAF5Q5TEU4 345 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 C16orf47Q6ZP98 133 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 DGAT2L6Q6ZPD8 337 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 CPSF7Q8N684 471 aaKnown RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 GBP7Q8N8V2 638 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 POGLUT1Q8NBL1 392 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 NUBPLQ8TB37 319 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 RDH11Q8TC12 318 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 METTL6Q8TCB7 284 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 RIT1Q92963 219 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 SENP5Q96HI0 755 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 GPR137Q96N19 417 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 RASL10BQ96S79 203 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 HBEGFQ99075 208 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 CNPPD1Q9BV87 410 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 LIN28AQ9H9Z2 209 aaKnown RBP11.03□□□□□ -0.64
HMGN1-213ENST00000482192 HPF1Q9NWY4 346 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 VPS29Q9UBQ0 182 aa11.03□□□□□ -0.64
HMGN1-213ENST00000482192 C1orf226A1L170 272 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 WASHC1A8K0Z3 465 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 NPIPA5E9PKD4 350 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 H3BQF6 201 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 COPEO14579 308 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 PGRMC2O15173 223 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 PEX1O43933 1283 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 PLIN3O60664 434 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 OR6B1O95007 311 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 SLU7O95391 586 aaKnown RBP11.02□□□□□ -0.65
HMGN1-213ENST00000482192 ESRRBO95718 433 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 NUDT17P0C025 328 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 SOX3P41225 446 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 MEOX1P50221 254 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 ERVK-8P63133 956 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 ZNF267Q14586 743 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-213ENST00000482192 MPEG1Q2M385 716 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 TCHHL1Q5QJ38 904 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-213ENST00000482192 C1QL3Q5VWW1 255 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 EMBQ6PCB8 327 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 OPN5Q6U736 354 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 RTL4Q6ZR62 310 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 MDGA2Q7Z553 956 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 SULF2Q8IWU5 870 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 C9orf40Q8IXQ3 194 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 C1orf52Q8N6N3 182 aaKnown RBP11.02□□□□□ -0.65
HMGN1-213ENST00000482192 CCNYL1Q8N7R7 359 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 PSD4Q8NDX1 1056 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 OR4K14Q8NGD5 310 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 SREK1Q8WXA9 508 aaKnown RBP11.02□□□□□ -0.65
HMGN1-213ENST00000482192 RELTQ969Z4 430 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 TSPAN10Q9H1Z9 355 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-213ENST00000482192 GSTO2Q9H4Y5 243 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 MID1IP1Q9NPA3 183 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 PLEKHB1Q9UF11 243 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-213ENST00000482192 NPIPA1Q9UND3 350 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 ERVK-19Q9WJR5 959 aa11.02□□□□□ -0.65
HMGN1-213ENST00000482192 FLNCQ14315 2725 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 TRGV8A0A0C4DH27 118 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 GOLGA6L10A6NI86 522 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 OR6C76A6NM76 312 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 HRKO00198 91 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 ASNA1O43681 348 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 SLC19A2O60779 497 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 CPA3P15088 417 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 CASP6P55212 293 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 DNAJB13P59910 316 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 IFFO1Q0D2I5 559 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 ASPHQ12797 758 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 SPIN4Q56A73 249 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 SLC48A1Q6P1K1 146 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 WDR93Q6P2C0 686 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 IL20RBQ6UXL0 311 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 RNF111Q6ZNA4 994 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 SLC29A4Q7RTT9 530 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 SIAH3Q8IW03 269 aa11.01□□□□□ -0.65
HMGN1-213ENST00000482192 GALNT12Q8IXK2 581 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms