RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 Q6ZRG5 221 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 LMNTD2Q8IXW0 634 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 ZNF485Q8NCK3 441 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 CHDHQ8NE62 594 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-210ENST00000482158 NEK11Q8NG66 645 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 OR1B1Q8NGR6 318 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 EXOC6Q8TAG9 804 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 P3H4Q92791 437 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 ESAMQ96AP7 390 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 CDHR1Q96JP9 859 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 CAPNS2Q96L46 248 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 ZNF597Q96LX8 424 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 CHCHD5Q9BSY4 110 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 TEX13AQ9BXU3 409 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-210ENST00000482158 MOB1AQ9H8S9 216 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 NDUFA13Q9P0J0 144 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 IL19Q9UHD0 177 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 NARFQ9UHQ1 456 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 ZNF346Q9UL40 294 aaKnown RBP4.6□□□□□ -1.67
SF3B1-210ENST00000482158 KIF7Q2M1P5 1343 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 GPRASP1Q5JY77 1395 aa4.6□□□□□ -1.67
SF3B1-210ENST00000482158 REC8O95072 547 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 SERPINF2P08697 491 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 OXTRP30559 389 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 ATP6V1E1P36543 226 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 CAPGP40121 348 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 GSK3BP49841 420 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 CDC37Q16543 378 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-210ENST00000482158 CCL14Q16627 93 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 CDHR3Q6ZTQ4 885 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 BANPQ8N9N5 519 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 C17orf47Q8NEP4 570 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 OR4F5Q8NH21 305 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 KIAA1524Q8TCG1 905 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 PTPRUQ92729 1446 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 RPGRIP1Q96KN7 1286 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 RUNDC3BQ96NL0 473 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 TMEM237Q96Q45 408 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 ATF6BQ99941 703 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 DCTN5Q9BTE1 182 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 STRADBQ9C0K7 418 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 TRPV6Q9H1D0 765 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 LIME1Q9H400 295 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 SLC25A19Q9HC21 320 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 ANO10Q9NW15 660 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 SPATA2Q9UM82 520 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 STRAPQ9Y3F4 350 aaKnown RBP4.59□□□□□ -1.67
SF3B1-210ENST00000482158 RAD54L2Q9Y4B4 1467 aa4.59□□□□□ -1.67
SF3B1-210ENST00000482158 A0A0U1RQG5 324 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 SYCE3A1L190 88 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 ATP6V1G1O75348 118 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 SEMA4FO95754 770 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 HCKP08631 526 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 CCDC159P0C7I6 412 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 STMN1P16949 149 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 ZNF18P17022 549 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 SLC1A6P48664 564 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 CCZ1BP86790 482 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 CCZ1P86791 482 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 FASTKQ14296 549 aaKnown RBP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 GPAT3Q53EU6 434 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 HERC4Q5GLZ8 1057 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 MUC21Q5SSG8 566 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 C1orf189Q5VU69 101 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 WDR25Q64LD2 544 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 RTL6Q6ICC9 239 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 RAB12Q6IQ22 244 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 CDC42EP5Q6NZY7 148 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 NUFIP2Q7Z417 695 aaKnown RBP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 SLC22A16Q86VW1 577 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 RNF130Q86XS8 419 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 CCDC71Q8IV32 467 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 ARL10Q8N8L6 244 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 TAF15Q92804 592 aaKnown RBP eCLIP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 SPAG8Q99932 426 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 ABCG4Q9H172 646 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 NT5DC2Q9H857 520 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 PANK3Q9H999 370 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 SYTL2Q9HCH5 934 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 ZNF446Q9NWS9 450 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 FAM153AQ9UHL3 310 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 DNPEPQ9ULA0 475 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 RPH3AQ9Y2J0 694 aaPredicted RBP4.58□□□□□ -1.68
SF3B1-210ENST00000482158 MOB4Q9Y3A3 225 aa4.58□□□□□ -1.68
SF3B1-210ENST00000482158 A0A0U1RRA0 63 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 RPL37AP8A6NKH3 93 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 TMCO5BA8MYB1 307 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 PDHXO00330 501 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 EEF2KO00418 725 aaKnown RBP4.57□□□□□ -1.68
SF3B1-210ENST00000482158 CHEK1O14757 476 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 NME2P1O60361 137 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 TSPAN2O60636 221 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 IGHG3P01860 377 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 FOSL2P15408 326 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 LMO2P25791 158 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 ALDH3B1P43353 468 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 CCL11P51671 97 aa4.57□□□□□ -1.68
SF3B1-210ENST00000482158 PPP1R8Q12972 351 aaKnown RBP4.57□□□□□ -1.68
SF3B1-210ENST00000482158 RAPSNQ13702 412 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms