RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 RNF4P78317 190 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 SRSF11Q05519 484 aaKnown RBP13.77□□□□□ -0.21
OPTN-210ENST00000482140 RBPJQ06330 500 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 POLEQ07864 2286 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 CSTF3Q12996 717 aaKnown RBP13.77□□□□□ -0.21
OPTN-210ENST00000482140 CFAP157Q5JU67 520 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 TCHHL1Q5QJ38 904 aaPredicted RBP13.77□□□□□ -0.21
OPTN-210ENST00000482140 C6orf163Q5TEZ5 329 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 GPALPP1Q8IXQ4 340 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 RIBC1Q8N443 379 aaPredicted RBP13.77□□□□□ -0.21
OPTN-210ENST00000482140 ZNF321PQ8N8H1 164 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 OR8K3Q8NH51 312 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 ZNF721Q8TF20 911 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 SENP5Q96HI0 755 aaPredicted RBP13.77□□□□□ -0.21
OPTN-210ENST00000482140 CNPPD1Q9BV87 410 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 IQCGQ9H095 443 aaKnown RBP13.77□□□□□ -0.21
OPTN-210ENST00000482140 TIMMDC1Q9NPL8 285 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 HPF1Q9NWY4 346 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 TEX10Q9NXF1 929 aaPredicted RBP13.77□□□□□ -0.21
OPTN-210ENST00000482140 VPS29Q9UBQ0 182 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.77□□□□□ -0.21
OPTN-210ENST00000482140 ERRFI1Q9UJM3 462 aaPredicted RBP13.77□□□□□ -0.21
OPTN-210ENST00000482140 MID2Q9UJV3 735 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 V9GYY5 206 aaPredicted RBP13.77□□□□□ -0.21
OPTN-210ENST00000482140 LRRK2Q5S007 2527 aa13.77□□□□□ -0.21
OPTN-210ENST00000482140 PTPN13Q12923 2485 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 ASPDHA6ND91 283 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 G3V2L1 256 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 PLIN3O60664 434 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 CRCPO75575 148 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 MST1P26927 711 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 HK2P52789 917 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 PER3P56645 1201 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 ERVK-8P63133 956 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 NDUFAF5Q5TEU4 345 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 EMBQ6PCB8 327 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 IL20RBQ6UXL0 311 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 C16orf47Q6ZP98 133 aaPredicted RBP13.76□□□□□ -0.21
OPTN-210ENST00000482140 SH2D5Q6ZV89 423 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 C4orf33Q8N1A6 199 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 C1orf52Q8N6N3 182 aaKnown RBP13.76□□□□□ -0.21
OPTN-210ENST00000482140 OR4K14Q8NGD5 310 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 OR2W6PQ8NHA6 318 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 RDH11Q8TC12 318 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 RIT1Q92963 219 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 FBXL20Q96IG2 436 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 FRMD6Q96NE9 622 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 RASL10BQ96S79 203 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 GSTO2Q9H4Y5 243 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 MID1IP1Q9NPA3 183 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 ERVK-19Q9WJR5 959 aa13.76□□□□□ -0.21
OPTN-210ENST00000482140 ASH1LQ9NR48 2969 aaKnown RBP13.76□□□□□ -0.21
OPTN-210ENST00000482140 CROCCQ5TZA2 2017 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 TMEM200CA6NKL6 621 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 WASHC1A8K0Z3 465 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 KLRC4-KLRK1H3BQV0 150 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 PGRMC2O15173 223 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 ESRRBO95718 433 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 NUDT17P0C025 328 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 SLC35E2P0CK97 266 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 CPA3P15088 417 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 ZNF24P17028 368 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 DEKP35659 375 aaKnown RBP13.75□□□□□ -0.21
OPTN-210ENST00000482140 MEOX1P50221 254 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 NAGLUP54802 743 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 GALNT1Q10472 559 aaPredicted RBP13.75□□□□□ -0.21
OPTN-210ENST00000482140 TBL3Q12788 808 aaKnown RBP13.75□□□□□ -0.21
OPTN-210ENST00000482140 ZNF267Q14586 743 aaPredicted RBP13.75□□□□□ -0.21
OPTN-210ENST00000482140 SPRED3Q2MJR0 410 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 C4orf17Q53FE4 359 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 WDR93Q6P2C0 686 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 RNF111Q6ZNA4 994 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 SLC29A4Q7RTT9 530 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 ZNF227Q86WZ6 799 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 CPSF7Q8N684 471 aaKnown RBP13.75□□□□□ -0.21
OPTN-210ENST00000482140 GBP7Q8N8V2 638 aaPredicted RBP13.75□□□□□ -0.21
OPTN-210ENST00000482140 POGLUT1Q8NBL1 392 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 AGAP11Q8TF27 550 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 UCN3Q969E3 161 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 FAIM2Q9BWQ8 316 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 TSPAN10Q9H1Z9 355 aaPredicted RBP13.75□□□□□ -0.21
OPTN-210ENST00000482140 TIMM22Q9Y584 194 aa13.75□□□□□ -0.21
OPTN-210ENST00000482140 DIDO1Q9BTC0 2240 aaKnown RBP13.75□□□□□ -0.21
OPTN-210ENST00000482140 USP9XQ93008 2570 aaPredicted RBP13.74□□□□□ -0.21
OPTN-210ENST00000482140 A0A1B0GUH1 482 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 C1orf226A1L170 272 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 GOLGA6L10A6NI86 522 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 ESPNB1AK53 854 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 NPIPA5E9PKD4 350 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 H3BQF6 201 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 LRRTM2O43300 516 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 PEX1O43933 1283 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 OR6B1O95007 311 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 IGKV3-11P04433 115 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 GALNSP34059 522 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 SOX3P41225 446 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 HTR6P50406 440 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 XKP51811 444 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 DNAJB13P59910 316 aa13.74□□□□□ -0.21
OPTN-210ENST00000482140 SLC18A2Q05940 514 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms