RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SLC9A3R1O14745 358 aaPredicted RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 HOXC11O43248 304 aaPredicted RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 KIAA0513O60268 411 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ENTPD6O75354 484 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 PCDH8O95206 1070 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 APOL3O95236 402 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 IFNW1P05000 195 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 RPLP0P05388 317 aaKnown RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 OR12D1P0DN82 309 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 DDCP20711 480 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 UQCRC2P22695 453 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 NR4A2P43354 598 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 PRKAG1P54619 331 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 RBBP4Q09028 425 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 PIN1Q13526 163 aaPredicted RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 ZNF630Q2M218 657 aaPredicted RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 DESI1Q6ICB0 168 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ZNF770Q6IQ21 691 aaPredicted RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 REEP3Q6NUK4 255 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 TCTN3Q6NUS6 607 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 PAQR6Q6TCH4 344 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 PTCHD4Q6ZW05 846 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 DGLUCYQ7Z3D6 616 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 TAGAPQ8N103 731 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 CELF2-AS1Q8N7Q2 184 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 TMIEQ8NEW7 156 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 WDR36Q8NI36 951 aaKnown RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 CXorf40AQ8TE69 158 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 APOBEC4Q8WW27 367 aaKnown RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 TEFMQ96QE5 360 aaKnown RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 RAD9AQ99638 391 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 C17orf62Q9BQA9 187 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 MENTQ9BUN1 341 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 MS4A8Q9BY19 250 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 TMEM245Q9H330 911 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 DPEP2Q9H4A9 486 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 PRSS16Q9NQE7 514 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 DYRK4Q9NR20 520 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 SLC27A6Q9Y2P4 619 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 SCN3AQ9NY46 2000 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 IGKV1-8A0A0C4DH67 115 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 C5orf58C9J3I9 102 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 M0R3H8 397 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 ZW10O43264 779 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 MFN2O95140 757 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 KRT75O95678 551 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 FGF19O95750 216 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 PAK4O96013 591 aaPredicted RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 C8orf89P0DMQ9 161 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 ACP5P13686 325 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 PCSK2P16519 638 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 TAS2R38P59533 333 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 DPTQ07507 201 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 KCNJ8Q15842 424 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 FAM109BQ6ICB4 259 aaPredicted RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 FRMPD2BQ6IN97 320 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 PNCKQ6P2M8 343 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 LCTLQ6UWM7 567 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 TP53I13Q8NBR0 393 aaPredicted RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 HCAR2Q8TDS4 363 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 XAGE5Q8WWM1 108 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 LINC00615Q96LM1 132 aaPredicted RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 QRSL1Q9H0R6 528 aaKnown RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 TPK1Q9H3S4 243 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 PLCXD1Q9NUJ7 323 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 FTSJ1Q9UET6 329 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 KCNK6Q9Y257 313 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 ANGPT4Q9Y264 503 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 C17orf113A0A1B0GUU1 675 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 OR52A4PA6NMU1 304 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 MID1O15344 667 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 PDPK1O15530 556 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 NARSO43776 548 aaKnown RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 KELP23276 732 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 AZGP1P25311 298 aaKnown RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 CRISP1P54107 249 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 CDK3Q00526 305 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 MLF2Q15773 248 aaPredicted RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 ZMAT1Q5H9K5 638 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 PIP5KL1Q5T9C9 394 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 SAXO2Q658L1 398 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 USP43Q70EL4 1123 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 KRT78Q8N1N4 520 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 PDXPQ96GD0 296 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 COL21A1Q96P44 957 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 MGLLQ99685 303 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 BCL7BQ9BQE9 202 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 CNPPD1Q9BV87 410 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 IMP3Q9NV31 184 aaKnown RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 GPR34Q9UPC5 381 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 TRPM6Q9BX84 2022 aa10.25□□□□□ -0.77
VPS52-217ENST00000478934 SNRNP200O75643 2136 aaKnown RBP10.25□□□□□ -0.77
VPS52-217ENST00000478934 H3BN98 237 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 ARHGAP33O14559 1287 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 RGS5O15539 181 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 OR10H3O60404 316 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 GSTT2P0CG29 244 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 GSTT2BP0CG30 244 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 RHCEP18577 417 aa10.24□□□□□ -0.77
VPS52-217ENST00000478934 DRD3P35462 400 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms