RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 KCT2Q8NC54 265 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ZFP90Q8TF47 636 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ARMC5Q96C12 935 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 RBMXL1Q96E39 390 aaKnown RBP5.23□□□□□ -1.57
USF3-202ENST00000478658 TMEM41AQ96HV5 264 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 DMRT3Q9NQL9 472 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 OR12D3Q9UGF7 316 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 SLC7A7Q9UM01 511 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 DHDHQ9UQ10 334 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TBX22Q9Y458 520 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TMEM238LA0A1B0GVL6 79 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 A6NJY4 79 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 IMPA2O14732 288 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ECI2O75521 394 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 SRMP19623 302 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 RAB3BP20337 219 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 RAB5AP20339 215 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CYP2F1P24903 491 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TACR3P29371 465 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CACNG1Q06432 222 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ZNF33BQ06732 778 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 PHYHD1Q5SRE7 291 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ATG9BQ674R7 924 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ACSM6Q6P461 480 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 OR2T33Q8NG76 320 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 HNRNPLLQ8WVV9 542 aaKnown RBP5.23□□□□□ -1.57
USF3-202ENST00000478658 SMPDL3AQ92484 453 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 BCO2Q9BYV7 579 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 FAM117AQ9C073 453 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ZNF768Q9H5H4 540 aaKnown RBP5.23□□□□□ -1.57
USF3-202ENST00000478658 LRRC4CQ9HCJ2 640 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 USP36Q9P275 1121 aaKnown RBP5.23□□□□□ -1.57
USF3-202ENST00000478658 DNAJB11Q9UBS4 358 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ASB4Q9Y574 426 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 A2ML1A8K2U0 1454 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ZCWPW2A0A1B0GU75 182 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 A6NIZ1 184 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 GSG1L2A8MUP6 293 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 FAAHO00519 579 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TAF5LO75529 589 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 P04436 131 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 MAP2K3P46734 347 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TAS2R45P59539 299 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 RAP1BP61224 184 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 RAP1AP62834 184 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 RFTN1Q14699 578 aaPredicted RBP5.23□□□□□ -1.57
USF3-202ENST00000478658 SFXN4Q6P4A7 337 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CRELD2Q6UXH1 353 aaPredicted RBP5.23□□□□□ -1.57
USF3-202ENST00000478658 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.23□□□□□ -1.57
USF3-202ENST00000478658 OR6C4Q8NGE1 309 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 SPATA20Q8TB22 786 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ISOC1Q96CN7 298 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 GAL3ST4Q96RP7 486 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 SLC30A2Q9BRI3 323 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 SACM1LQ9NTJ5 587 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 DEC1Q9P2X7 70 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 SLC35A3Q9Y2D2 325 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 C5orf60A6NFR6 353 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ZNF850A8MQ14 1090 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 JAK2O60674 1132 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CYC1P08574 325 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 OR8U9P0C7N5 309 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CD72P21854 359 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 AHCYP23526 432 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ADORA1P30542 326 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 SPAM1P38567 509 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CCR10P46092 362 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 KIAA1024LP59773 190 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 MS4A2Q01362 244 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 FOXM1Q08050 763 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 IRF5Q13568 498 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 IZUMO4Q1ZYL8 232 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 C14orf28Q4W4Y0 310 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 UGT2A3Q6UWM9 527 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 HIST2H3AQ71DI3 136 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 P2RY8Q86VZ1 359 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TMEM185AQ8NFB2 350 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 OR4K15Q8NH41 348 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 FIBINQ8TAL6 211 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 THAP4Q8WY91 577 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ST8SIA2Q92186 375 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 GRAMD2BQ96HH9 432 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TMEM176AQ96HP8 235 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 ERGIC2Q96RQ1 377 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TMEM246Q9BRR3 403 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 GAREM1Q9H706 876 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 AGPAT3Q9NRZ7 376 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 B4GALT6Q9UBX8 382 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 COL1A2P08123 1366 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CNTRLQ7Z7A1 2325 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 A0A1W2PS29 197 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 VSTM2BA6NLU5 285 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 SOBPA7XYQ1 873 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 NUDT19A8MXV4 375 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 CLDN11O75508 207 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 POU2F2P09086 479 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TRAPPC2P0DI81 140 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TRAPPC2BP0DI82 140 aa5.23□□□□□ -1.57
USF3-202ENST00000478658 TPT1P13693 172 aaKnown RBP5.23□□□□□ -1.57
USF3-202ENST00000478658 DAP3P51398 398 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms