RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 RTN2O75298 545 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 CSO75390 466 aaKnown RBP1.62□□□□□ -2.15
HPS3-205ENST00000478525 STBD1O95210 358 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 OR6A2O95222 327 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 TOP1P11387 765 aaKnown RBP1.62□□□□□ -2.15
HPS3-205ENST00000478525 PDGFRAP16234 1089 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 UGT1A6P19224 532 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 RPS8P62241 208 aaKnown RBP1.62□□□□□ -2.15
HPS3-205ENST00000478525 TNK1Q13470 666 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 PRPF4BQ13523 1007 aaKnown RBP1.62□□□□□ -2.15
HPS3-205ENST00000478525 C16orf72Q14CZ0 275 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 MPPED2Q15777 294 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 KYAT1Q16773 422 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 UNC50Q53HI1 259 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 PAGE2BQ5JRK9 111 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 ERMARDQ5T6L9 678 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 SMYD1Q8NB12 490 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 ZNF397Q8NF99 534 aaPredicted RBP1.62□□□□□ -2.15
HPS3-205ENST00000478525 PHF10Q8WUB8 498 aaKnown RBP1.62□□□□□ -2.15
HPS3-205ENST00000478525 C16orf58Q96GQ5 468 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 ERGIC2Q96RQ1 377 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 WWP1Q9H0M0 922 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 TAS2R16Q9NYV7 291 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 LRRK1Q38SD2 2015 aa1.62□□□□□ -2.15
HPS3-205ENST00000478525 RAI1Q7Z5J4 1906 aaPredicted RBP1.62□□□□□ -2.15
HPS3-205ENST00000478525 ANKRD18BA2A2Z9 1011 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 CCDC162PA2VCL2 907 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 TRABD2BA6NFA1 517 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 PPIP5K2O43314 1243 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 CSDE1O75534 798 aaKnown RBP1.61□□□□□ -2.15
HPS3-205ENST00000478525 IGHV3-23P01764 117 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 IGHV3-9P01782 118 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 ZP3P21754 424 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 CPT2P23786 658 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 CALML3P27482 149 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 XCR1P46094 333 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 CAPZA2P47755 286 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 NT5C2P49902 561 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 SLC12A3P55017 1021 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 MSLNQ13421 630 aaPredicted RBP1.61□□□□□ -2.15
HPS3-205ENST00000478525 IQCCQ4KMZ1 466 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 LYPLAL1Q5VWZ2 237 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 OR4F5Q8NH21 305 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 SAP25Q8TEE9 199 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 RAD54LQ92698 747 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 SKA1Q96BD8 255 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 ZNF665Q9H7R5 613 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 EIF3KQ9UBQ5 218 aaKnown RBP1.61□□□□□ -2.15
HPS3-205ENST00000478525 MORF4L1Q9UBU8 362 aa1.61□□□□□ -2.15
HPS3-205ENST00000478525 ANKRD63C9JTQ0 380 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 GPX5O75715 221 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 TOXO94900 526 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 SNRPCP09234 159 aaKnown RBP1.6□□□□□ -2.15
HPS3-205ENST00000478525 NR2F1P10589 423 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 PSMA3P25788 255 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 PSMB4P28070 264 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 OR3A1P47881 315 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 OR3A4PP47883 348 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 CAV2P51636 162 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 SERTAD2Q14140 314 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 UGCGQ16739 394 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 SPATA46Q5T0L3 261 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 CST9LP1Q5W188 147 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 PPP1R21Q6ZMI0 780 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 IL34Q6ZMJ4 242 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 OTOAQ7RTW8 1153 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 TIGD4Q8IY51 512 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 ZNF786Q8N393 782 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 TEX19Q8NA77 164 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 RNF149Q8NC42 400 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 CHDHQ8NE62 594 aaPredicted RBP1.6□□□□□ -2.15
HPS3-205ENST00000478525 SEPT8Q92599 483 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 MRPL24Q96A35 216 aaKnown RBP1.6□□□□□ -2.15
HPS3-205ENST00000478525 PNPLA2Q96AD5 504 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 NANOGQ9H9S0 305 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 NECAP2Q9NVZ3 263 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 RAI14Q9P0K7 980 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 ZNF221Q9UK13 617 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 ETV7Q9Y603 341 aa1.6□□□□□ -2.15
HPS3-205ENST00000478525 IGKV1D-17A0A075B6S4 117 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 A0A0B4J203 849 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 AHCYL1O43865 530 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 FCGR3BO75015 233 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 FYNP06241 537 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 LBPP18428 481 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 ARHGDIBP52566 201 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 ABRQ12979 859 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 KCTD2Q14681 263 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 TFAP2EQ6VUC0 442 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 MEX3DQ86XN8 651 aaKnown RBP1.59□□□□□ -2.15
HPS3-205ENST00000478525 GVQW1Q8N7I0 195 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 CCDC26Q8TAB7 109 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 TCP11Q8WWU5 503 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 RAB40CQ96S21 281 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 RSPO3Q9BXY4 272 aaPredicted RBP1.59□□□□□ -2.15
HPS3-205ENST00000478525 RNF41Q9H4P4 317 aaPredicted RBP1.59□□□□□ -2.15
HPS3-205ENST00000478525 PDRG1Q9NUG6 133 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 NSMCE4AQ9NXX6 385 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 WDR35Q9P2L0 1181 aa1.59□□□□□ -2.15
HPS3-205ENST00000478525 DPM3Q9P2X0 92 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms