RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CRCPO75575 148 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 BIKQ13323 160 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 ZNF766Q5HY98 468 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 CEP85LQ5SZL2 805 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 HSDL2Q6YN16 418 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 ST13P4Q8IZP2 240 aaPredicted RBP14.5□□□□□ -0.09
HMGA1-206ENST00000478214 ZNF721Q8TF20 911 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 TM4SF18Q96CE8 201 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 APIPQ96GX9 242 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 SENP5Q96HI0 755 aaPredicted RBP14.5□□□□□ -0.09
HMGA1-206ENST00000478214 ZIM3Q96PE6 472 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 TAAR6Q96RI8 345 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 AGPAT4Q9NRZ5 378 aa14.5□□□□□ -0.09
HMGA1-206ENST00000478214 SERTM1A2A2V5 107 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 H3BQF6 201 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 FCHO1O14526 889 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 OR10H2O60403 315 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 GUCY1B2O75343 617 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 ITGA10O75578 1167 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 NEURL1O76050 574 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 TRHRP34981 398 aaPredicted RBP14.49□□□□□ -0.09
HMGA1-206ENST00000478214 RAE1P78406 368 aaKnown RBP14.49□□□□□ -0.09
HMGA1-206ENST00000478214 BTKQ06187 659 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 ACSM2AQ08AH3 577 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 MRPL49Q13405 166 aaKnown RBP14.49□□□□□ -0.09
HMGA1-206ENST00000478214 NR6A1Q15406 480 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 ZNF750Q32MQ0 723 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 ACSM2BQ68CK6 577 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 CLEC6AQ6EIG7 209 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 FAM180AQ6UWF9 173 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 FAR1Q8WVX9 515 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 PELOQ9BRX2 385 aaKnown RBP14.49□□□□□ -0.09
HMGA1-206ENST00000478214 CENPHQ9H3R5 247 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 KLHL1Q9NR64 748 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 SENP1Q9P0U3 644 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 LRFN1Q9P244 771 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 COPS7AQ9UBW8 275 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 MCM8Q9UJA3 840 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 CES1P1Q9UKY3 287 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 PCDHA9Q9Y5H5 950 aa14.49□□□□□ -0.09
HMGA1-206ENST00000478214 WWP2O00308 870 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 DYRK3O43781 588 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 PCDH7O60245 1069 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 CBX6O95503 412 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 IGKV3-11P04433 115 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 SLC35E2P0CK97 266 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 UROSP10746 265 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 CD46P15529 392 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 PIK3R1P27986 724 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 CYB561P49447 251 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 HLCSP50747 726 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 XKP51811 444 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 TRA2BP62995 288 aaKnown RBP14.48□□□□□ -0.09
HMGA1-206ENST00000478214 RNF4P78317 190 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 PMP22Q01453 160 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 SRSF11Q05519 484 aaKnown RBP14.48□□□□□ -0.09
HMGA1-206ENST00000478214 ASPHQ12797 758 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 ZNF267Q14586 743 aaPredicted RBP14.48□□□□□ -0.09
HMGA1-206ENST00000478214 INAQ16352 499 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 SPIN4Q56A73 249 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 SPDYAQ5MJ70 313 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 SLC48A1Q6P1K1 146 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 ZCCHC23Q6ZST2 131 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 EXOC3L1Q86VI1 746 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 ZNF227Q86WZ6 799 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 OR4K14Q8NGD5 310 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 RIT1Q92963 219 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 FBXL20Q96IG2 436 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 TRMOQ9BU70 441 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 CNPPD1Q9BV87 410 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 TRIM45Q9H8W5 580 aaPredicted RBP14.48□□□□□ -0.09
HMGA1-206ENST00000478214 MYOTQ9UBF9 498 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 YARS2Q9Y2Z4 477 aaKnown RBP14.48□□□□□ -0.09
HMGA1-206ENST00000478214 PCDHGB6Q9Y5F9 930 aa14.48□□□□□ -0.09
HMGA1-206ENST00000478214 GNG14A0A1W2PPG7 69 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 C1orf226A1L170 272 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 CDK2AP1O14519 115 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 CTIFO43310 598 aaKnown RBP14.47□□□□□ -0.09
HMGA1-206ENST00000478214 NPHS1O60500 1241 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 OR2J2O76002 312 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 RASAL1O95294 804 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 CHRNGP07510 517 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 TIA1P31483 386 aaKnown RBP eCLIP14.47□□□□□ -0.09
HMGA1-206ENST00000478214 ETV4P43268 484 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 ALDH9A1P49189 494 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 SSR4P51571 173 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 HK2P52789 917 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 ERVK-8P63133 956 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 IMPG1Q17R60 797 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 SPRED3Q2MJR0 410 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 SLC25A25Q6KCM7 469 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 TRIM46Q7Z4K8 759 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 C9orf40Q8IXQ3 194 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 TMEM156Q8N614 296 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 HORMAD2Q8N7B1 307 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 BCORP1Q8N888 145 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 OR8K3Q8NH51 312 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 C11orf24Q96F05 449 aaPredicted RBP14.47□□□□□ -0.09
HMGA1-206ENST00000478214 SCMH1Q96GD3 660 aa14.47□□□□□ -0.09
HMGA1-206ENST00000478214 ART5Q96L15 291 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms