RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 SPRR3Q9UBC9 169 aa15.4■□□□□ 0.06
TRIM13-208ENST00000478111 RNF14Q9UBS8 474 aa15.4■□□□□ 0.06
TRIM13-208ENST00000478111 ACAD8Q9UKU7 415 aa15.4■□□□□ 0.06
TRIM13-208ENST00000478111 TRGV5A0A0B4J1U4 118 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 PLPP1O14494 284 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 HCN1O60741 890 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 KERAO60938 352 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 WDR1O75083 606 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 PRKRAO75569 313 aaKnown RBP15.39■□□□□ 0.05
TRIM13-208ENST00000478111 S100BP04271 92 aaPredicted RBP15.39■□□□□ 0.05
TRIM13-208ENST00000478111 COX7A2P14406 83 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 SERPINB1P30740 379 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 HNRNPH2P55795 449 aaKnown RBP15.39■□□□□ 0.05
TRIM13-208ENST00000478111 BIKQ13323 160 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 KBTBD12Q3ZCT8 623 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 GRTP1Q5TC63 336 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 GRHL2Q6ISB3 625 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 GPR180Q86V85 440 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 HUS1BQ8NHY5 278 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 NRGNQ92686 78 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 TANKQ92844 425 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 RGMAQ96B86 450 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 SARAFQ96BY9 339 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 SPACA9Q96E40 222 aaPredicted RBP15.39■□□□□ 0.05
TRIM13-208ENST00000478111 RBM18Q96H35 190 aaKnown RBP15.39■□□□□ 0.05
TRIM13-208ENST00000478111 ZNF703Q9H7S9 590 aaPredicted RBP15.39■□□□□ 0.05
TRIM13-208ENST00000478111 NMRAL1Q9HBL8 299 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 MS4A12Q9NXJ0 267 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 OPTCQ9UBM4 332 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 TSC22D4Q9Y3Q8 395 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 L3MBTL1Q9Y468 752 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 FLNAP21333 2647 aaKnown RBP15.39■□□□□ 0.05
TRIM13-208ENST00000478111 NAV3Q8IVL0 2385 aa15.39■□□□□ 0.05
TRIM13-208ENST00000478111 FAM187AA6NFU0 413 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 LRRC3CA6NJW4 275 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 SUPT3HB4E1H0 165 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 PROM1O43490 865 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 RAD51CO43502 376 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 SUPT3HO75486 399 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 CLPSP04118 112 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 GSTA2P09210 222 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 DNAJA1P31689 397 aaKnown RBP15.38■□□□□ 0.05
TRIM13-208ENST00000478111 PIK3CBP42338 1070 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 TNFRSF17Q02223 184 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 CALCOCO2Q13137 446 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 DDX39BQ13838 428 aaKnown RBP15.38■□□□□ 0.05
TRIM13-208ENST00000478111 C1orf185Q5T7R7 199 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 CES4AQ5XG92 561 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 MRM1Q6IN84 353 aaKnown RBP15.38■□□□□ 0.05
TRIM13-208ENST00000478111 TMEM200AQ86VY9 491 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 CTAGE3PQ8IX95 158 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 ST13P4Q8IZP2 240 aaPredicted RBP15.38■□□□□ 0.05
TRIM13-208ENST00000478111 CLYBLQ8N0X4 340 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 LRRC25Q8N386 305 aaPredicted RBP15.38■□□□□ 0.05
TRIM13-208ENST00000478111 ZCCHC7Q8N3Z6 543 aaKnown RBP15.38■□□□□ 0.05
TRIM13-208ENST00000478111 SLC15A4Q8N697 577 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 PPM1NQ8N819 430 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 SLC22A8Q8TCC7 542 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 NXNL1Q96CM4 212 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 LDAHQ9H6V9 325 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 GRPEL1Q9HAV7 217 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 ZFP64Q9NPA5 681 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 DMRT3Q9NQL9 472 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 ADGRE2Q9UHX3 823 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 ASB4Q9Y574 426 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 CHCHD2Q9Y6H1 151 aaPredicted RBP15.38■□□□□ 0.05
TRIM13-208ENST00000478111 KIAA1549Q9HCM3 1950 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 MED12Q93074 2177 aa15.38■□□□□ 0.05
TRIM13-208ENST00000478111 LTA4HP09960 611 aaKnown RBP15.37■□□□□ 0.05
TRIM13-208ENST00000478111 FBXO45P0C2W1 286 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 CD1EP15812 388 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 ALOX15P16050 662 aaPredicted RBP15.37■□□□□ 0.05
TRIM13-208ENST00000478111 EPB42P16452 691 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 ART1P52961 327 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 ARFIP1P53367 373 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 SLC37A1P57057 533 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 HERVK_113P63132 956 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 ERVK-8P63133 956 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 PLIN5Q00G26 463 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 MYBPHQ13203 477 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 SPRED3Q2MJR0 410 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 WLSQ5T9L3 541 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 PRAMEF20Q5VT98 475 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 SEM1Q6ZVN7 128 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 RAPH1Q70E73 1250 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 CENPLQ8N0S6 344 aaPredicted RBP15.37■□□□□ 0.05
TRIM13-208ENST00000478111 FBXW8Q8N3Y1 598 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 TEX9Q8N6V9 391 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 SPATA4Q8NEY3 305 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 OR10G3Q8NGC4 313 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 UCN3Q969E3 161 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 MTERF1Q99551 399 aaKnown RBP15.37■□□□□ 0.05
TRIM13-208ENST00000478111 ERVK-6Q9BXR3 956 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 ACKR4Q9NPB9 350 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 PHF11Q9UIL8 331 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 CNOT11Q9UKZ1 510 aaKnown RBP15.37■□□□□ 0.05
TRIM13-208ENST00000478111 ERVK-19Q9WJR5 959 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 PCDHGB3Q9Y5G1 929 aa15.37■□□□□ 0.05
TRIM13-208ENST00000478111 A0A1W2PR48 441 aa15.36■□□□□ 0.05
TRIM13-208ENST00000478111 LRRC14BA6NHZ5 514 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms