RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CFL2Q9Y281 166 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 MRPS33Q9Y291 106 aaKnown RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ENPP4Q9Y6X5 453 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 TRIOBPQ9H2D6 2365 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 GJA8P48165 433 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CDH11P55287 796 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 SKP1P63208 163 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 RBBP4Q09028 425 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 MAP4K2Q12851 820 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 TCTN1Q2MV58 587 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 MLIPQ5VWP3 458 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ARL9Q6T311 187 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 SLCO4C1Q6ZQN7 724 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 OR4K5Q8NGD3 323 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 TUBA1CQ9BQE3 449 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 BTBD1Q9H0C5 482 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 NMNAT1Q9HAN9 279 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ZBTB20Q9HC78 741 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 HRASLS2Q9NWW9 162 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 BTNL2Q9UIR0 455 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CDH7Q9ULB5 785 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 SNX7Q9UNH6 387 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 A8MV72 311 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 PRRT4C9JH25 899 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 OR6A2O95222 327 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ETHE1O95571 254 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 RAB28P51157 221 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 GAB1Q13480 694 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 MAD2L1BPQ15013 274 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 QPRTQ15274 297 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 SYPL1Q16563 259 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 FIGNL1Q6PIW4 674 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CHMP1BQ7LBR1 199 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 B3GNT8Q7Z7M8 397 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 PLA2G15Q8NCC3 412 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ATP6V1C2Q8NEY4 427 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ZFP90Q8TF47 636 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 C11orf24Q96F05 449 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ZFP3Q96NJ6 502 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ASPNQ9BXN1 380 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 SLC17A9Q9BYT1 436 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 OR51E2Q9H255 320 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ACTL8Q9H568 366 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ERVK13-1Q9NX77 482 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CHURC1-FNTBB4DL54 471 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 IDH3BO43837 385 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 RNGTTO60942 597 aaKnown RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ZNF821O75541 412 aaPredicted RBP10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CBLP22681 906 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 GPR4P46093 362 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 NKG7Q16617 165 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 DEFB110Q30KQ9 67 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CDKL4Q5MAI5 379 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ALG1LQ6GMV1 187 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 RTL4Q6ZR62 310 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 FAM92BQ6ZTR7 304 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CBLL1Q75N03 491 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 L3MBTL4Q8NA19 623 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 OR51G2Q8NGK0 314 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 OR4C6Q8NH72 309 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 ZNF563Q8TA94 476 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 SLC6A17Q9H1V8 727 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 SLC35C2Q9NQQ7 365 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CNIH4Q9P003 139 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 IKZF2Q9UKS7 526 aa10.5□□□□□ -0.73
COL27A1-204ENST00000477421 CENPXA8MT69 81 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 PGRMC2O15173 223 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 KIAA0513O60268 411 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 HMGN2P05204 90 aaKnown RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 NPPBP16860 134 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 ITGB7P26010 798 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 CERS1P27544 350 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 MMP12P39900 470 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 SMSP52788 366 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 CDK3Q00526 305 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 ADIPOR2Q86V24 386 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 RANBP3LQ86VV4 465 aaPredicted RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 NUP43Q8NFH3 380 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 RHNO1Q9BSD3 238 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 RAB11FIP5Q9BXF6 653 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 CALML5Q9NZT1 146 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 HSFX1Q9UBD0 423 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 SPATA2Q9UM82 520 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 DAPL1A0PJW8 107 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 OR6C74A6NCV1 312 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 GRXCR2A6NFK2 248 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 DUXAA6NLW8 204 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 STX11O75558 287 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 MRPL3P09001 348 aaKnown RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 RHCEP18577 417 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 SLC15A1P46059 708 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 PHC1P78364 1004 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 SLC14A1Q13336 389 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 VEZF1Q14119 521 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 SUZ12Q15022 739 aaKnown RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 PTGES3Q15185 160 aaKnown RBP10.49□□□□□ -0.73
COL27A1-204ENST00000477421 PROX2Q3B8N5 592 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 IDNKQ5T6J7 187 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 TANGO2Q6ICL3 276 aa10.49□□□□□ -0.73
COL27A1-204ENST00000477421 NEK10Q6ZWH5 1172 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms