RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ANKRA2Q9H9E1 313 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 NEUROD4Q9HD90 331 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 MS4A12Q9NXJ0 267 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 PDP2Q9P2J9 529 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 AURKCQ9UQB9 309 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 TMEM150CB9EJG8 249 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 FGF17O60258 216 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 LDB3O75112 727 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 TIPRLO75663 272 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 DDX5P17844 614 aaKnown RBP13.6□□□□□ -0.23
COL4A6-206ENST00000477085 NTSP30990 170 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 CCT3P49368 545 aaKnown RBP13.6□□□□□ -0.23
COL4A6-206ENST00000477085 XKP51811 444 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 FOLH1Q04609 750 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 FAM53BQ14153 422 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 TCTE1Q5JU00 501 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 OR52E8Q6IFG1 317 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 DBX2Q6ZNG2 339 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 PRR23CQ6ZRP0 262 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 KBTBD2Q8IY47 623 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 METTL27Q8N6F8 245 aaPredicted RBP13.6□□□□□ -0.23
COL4A6-206ENST00000477085 HORMAD2Q8N7B1 307 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 ADCY4Q8NFM4 1077 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 OR10Q1Q8NGQ4 319 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 IFI44Q8TCB0 444 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 TACO1Q9BSH4 297 aaKnown RBP13.6□□□□□ -0.23
COL4A6-206ENST00000477085 PRDM9Q9NQV7 894 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 DCAF13Q9NV06 445 aaKnown RBP13.6□□□□□ -0.23
COL4A6-206ENST00000477085 HCN3Q9P1Z3 774 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 CORO2BQ9UQ03 480 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 ENTPD4Q9Y227 616 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 PCDHGA5Q9Y5G8 931 aa13.6□□□□□ -0.23
COL4A6-206ENST00000477085 GPR179Q6PRD1 2367 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 LNP1A1A4G5 178 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 TMEM229AB2RXF0 380 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-206ENST00000477085 KHNYNO15037 678 aaKnown RBP13.59□□□□□ -0.23
COL4A6-206ENST00000477085 HYAL3O43820 417 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-206ENST00000477085 NME6O75414 186 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-206ENST00000477085 OR2B3O76000 313 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 KRT75O95678 551 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 CPNE6O95741 557 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 SERPINA1P01009 418 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 GPIP06744 558 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 BMP2P12643 396 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 TLX1P31314 330 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-206ENST00000477085 MPIP34949 423 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 RAB38P57729 211 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 VAC14Q08AM6 782 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 SPIDRQ14159 915 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 ERV3-1Q14264 604 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 TMTC4Q5T4D3 741 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 IRAK1BP1Q5VVH5 260 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 GARNL3Q5VVW2 1013 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 TMEM107Q6UX40 140 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 ARHGAP22Q7Z5H3 698 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 TTC29Q8NA56 475 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-206ENST00000477085 RCBTB1Q8NDN9 531 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 SIMC1Q8NDZ2 872 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 OR4K14Q8NGD5 310 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 ANKRD9Q96BM1 317 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-206ENST00000477085 TBC1D20Q96BZ9 403 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 ZNF501Q96CX3 271 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-206ENST00000477085 MAGED4Q96JG8 741 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 SEPHS2Q99611 448 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 RBCK1Q9BYM8 510 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 IRAK4Q9NWZ3 460 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 C6orf203Q9P0P8 240 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-206ENST00000477085 PSME2Q9UL46 239 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 ZNF780BQ9Y6R6 833 aa13.59□□□□□ -0.23
COL4A6-206ENST00000477085 IGHV5-10-1A0A0J9YXX1 117 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 OR2W5A6NFC9 320 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 AGRPO00253 132 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 PRKD3O94806 890 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 NSA2O95478 260 aaKnown RBP13.58□□□□□ -0.23
COL4A6-206ENST00000477085 MT-ND1P03886 318 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 CAPNS1P04632 268 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 RETP07949 1114 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 MSL3P1P0C860 447 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 PEX2P28328 305 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 KDELR2P33947 212 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 GPC1P35052 558 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 ARL4DP49703 201 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 FADDQ13158 208 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 VEZF1Q14119 521 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 MAPK11Q15759 364 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 NDUFA9Q16795 377 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 LRRC36Q1X8D7 754 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 SPDYE7PQ495Y7 208 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 TBCELQ5QJ74 424 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 AMIGO2Q86SJ2 522 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 KMT5CQ86Y97 462 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 OR4D9Q8NGE8 314 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 FBXO30Q8TB52 745 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 DOK4Q8TEW6 326 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 KAT2AQ92830 837 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 NAT6Q93015 286 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 NCLNQ969V3 563 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 FAM162AQ96A26 154 aa13.58□□□□□ -0.23
COL4A6-206ENST00000477085 ELP4Q96EB1 424 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms