RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 TMEM51Q9NW97 253 aa6.34□□□□□ -1.39
LRCH3-215ENST00000476664 RNF14Q9UBS8 474 aa6.34□□□□□ -1.39
LRCH3-215ENST00000476664 ERVK-19Q9WJR5 959 aa6.34□□□□□ -1.39
LRCH3-215ENST00000476664 WDR83OSQ9Y284 106 aa6.34□□□□□ -1.39
LRCH3-215ENST00000476664 PAM16Q9Y3D7 125 aa6.34□□□□□ -1.39
LRCH3-215ENST00000476664 LOXL2Q9Y4K0 774 aa6.34□□□□□ -1.39
LRCH3-215ENST00000476664 SHROOM3Q8TF72 1996 aa6.34□□□□□ -1.39
LRCH3-215ENST00000476664 CENPVL1A0A0U1RR11 272 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 GSAPA4D1B5 854 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 C4orf47A7E2U8 309 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 C2CD4DB7Z1M9 353 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 MSTNO14793 375 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 SLC22A2O15244 555 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 FOXD2O60548 495 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-215ENST00000476664 SDC3O75056 442 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 LDB3O75112 727 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 GRAP2O75791 330 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 IGHEP01854 428 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 RALBP11234 206 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 NR4A1P22736 598 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 PAX7P23759 505 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 ACRV1P26436 265 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 AXLP30530 894 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 STX2P32856 288 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 GNL1P36915 607 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-215ENST00000476664 SLC6A8P48029 635 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 PPP3CCP48454 512 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 RGS4P49798 205 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 TNFSF10P50591 281 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 EEF1A2Q05639 463 aaKnown RBP6.33□□□□□ -1.4
LRCH3-215ENST00000476664 NME3Q13232 169 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 NONOQ15233 471 aaKnown RBP eCLIP6.33□□□□□ -1.4
LRCH3-215ENST00000476664 EXOC3L2Q2M3D2 409 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 FBXO48Q5FWF7 155 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 Q5PR19 223 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 ELFN2Q5R3F8 820 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 PLXDC2Q6UX71 529 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 TRMT10AQ8TBZ6 339 aaKnown RBP6.33□□□□□ -1.4
LRCH3-215ENST00000476664 PROKR1Q8TCW9 393 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 UBTD2Q8WUN7 234 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 FAM71F1Q96KD3 344 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-215ENST00000476664 GPR137Q96N19 417 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 PRMT1Q99873 361 aaKnown RBP6.33□□□□□ -1.4
LRCH3-215ENST00000476664 CBWD1Q9BRT8 395 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 SLC39A3Q9BRY0 314 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 ACTL8Q9H568 366 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 VCPKMTQ9H867 229 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 C10orf88Q9H8K7 445 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 MARCH7Q9H992 704 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 APMAPQ9HDC9 416 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 B3GAT1Q9P2W7 334 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 BCAP29Q9UHQ4 241 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 PCDHA7Q9UN72 937 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 FOXJ3Q9UPW0 622 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 TNNQ9UQP3 1299 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 KIAA1217Q5T5P2 1943 aa6.33□□□□□ -1.4
LRCH3-215ENST00000476664 MAPK8IP3Q9UPT6 1336 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 TRAV18A0A075B6X5 111 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 KIR2DS5A0A0G2JLQ3 304 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 GOLGA6L9A6NEM1 432 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 ANKRD61A6NGH8 418 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 C2CD4BA6NLJ0 364 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 OR52A4PA6NMU1 304 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 C5orf67F2Z3F1 127 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 J3QKU1 62 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 KIR2DS3K7RE56 304 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 ZNF197O14709 1029 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 GPR137BO60478 399 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 CTAG2O75638 210 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 WDPCPO95876 746 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 MMP1P03956 469 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 ITGB3P05106 788 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 APRTP07741 180 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 HOXB7P09629 217 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 CA8P35219 290 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 RAP1GAPP47736 663 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 RPP38P78345 283 aaKnown RBP6.32□□□□□ -1.4
LRCH3-215ENST00000476664 NUCB2P80303 420 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 CRYZQ08257 329 aaKnown RBP6.32□□□□□ -1.4
LRCH3-215ENST00000476664 NCBP1Q09161 790 aaKnown RBP6.32□□□□□ -1.4
LRCH3-215ENST00000476664 HSPA14Q0VDF9 509 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 FUT7Q11130 342 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 ZBTB17Q13105 803 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 MYBPHQ13203 477 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 RFTN1Q14699 578 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-215ENST00000476664 SYCP1Q15431 976 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 CTF1Q16619 201 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 ZNF311Q5JNZ3 666 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 EARS2Q5JPH6 523 aaKnown RBP6.32□□□□□ -1.4
LRCH3-215ENST00000476664 RABGAP1LQ5R372 815 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 NIPAL3Q6P499 406 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 FAM57BQ71RH2 274 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 ATG9AQ7Z3C6 839 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 BIVMQ86UB2 503 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 ADGRG3Q86Y34 549 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 UBQLNLQ8IYU4 475 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 MYOCDQ8IZQ8 938 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 NOA1Q8NC60 698 aaKnown RBP6.32□□□□□ -1.4
LRCH3-215ENST00000476664 OR4K1Q8NGD4 311 aa6.32□□□□□ -1.4
LRCH3-215ENST00000476664 SLC2A14Q8TDB8 520 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms