RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 OR4N4Q8N0Y3 316 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 OR7G3Q8NG95 312 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 C8orf48Q96LL4 319 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF347Q96SE7 839 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 OSBPL10Q9BXB5 764 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 CFHR5Q9BXR6 569 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 NUSAP1Q9BXS6 441 aaKnown RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 SLC46A2Q9BY10 475 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 CSNK1G1Q9HCP0 422 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 RANGRFQ9HD47 186 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 CCDC177Q9NQR7 707 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 ZDHHC3Q9NYG2 299 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 ZFR2Q9UPR6 939 aaKnown RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 MED16Q9Y2X0 877 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 PCDHGA10Q9Y5H3 936 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 PEX11BO96011 259 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 SOD2P04179 222 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 RLN1P04808 185 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 RB1P06400 928 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 NR2F6P10588 404 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 LIPCP11150 499 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 PRPS1L1P21108 318 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 SIM1P81133 766 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 SGCGQ13326 291 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 C1orf61Q13536 156 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 C10orf62Q5T681 223 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 CPZQ66K79 652 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 FAAH2Q6GMR7 532 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 NCEH1Q6PIU2 408 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 GDPD4Q6W3E5 623 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 CERS6Q6ZMG9 384 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF517Q6ZMY9 492 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 CNTN4Q8IWV2 1026 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 CYP4Z2PQ8N1L4 340 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 OR4F15Q8NGB8 312 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 RHEBL1Q8TAI7 183 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 TEX47Q8TBZ9 253 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 FGF14Q92915 247 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 FAM46AQ96IP4 442 aaKnown RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 RIPOR3Q96MK2 946 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 MBOAT4Q96T53 435 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 MGME1Q9BQP7 344 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 RBM38Q9H0Z9 239 aaKnown RBP4.76□□□□□ -1.65
CCDC39-204ENST00000476379 EGLN3Q9H6Z9 239 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 CD93Q9NPY3 652 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 INIPQ9NRY2 104 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 TMEM184CQ9NVA4 438 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 SARDHQ9UL12 918 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 ENTPD4Q9Y227 616 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 PLEKHM1Q9Y4G2 1056 aa4.76□□□□□ -1.65
CCDC39-204ENST00000476379 MGAMO43451 1857 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 NOTCH4Q99466 2003 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 MIA3Q5JRA6 1907 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 DMXL2Q8TDJ6 3036 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 HTR3EA5X5Y0 456 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 J3QLW9 94 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 DLGAP1O14490 977 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 SNRNP200O75643 2136 aaKnown RBP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 ADH1AP07327 375 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 SRCP12931 536 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF19P17023 458 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 NT5EP21589 574 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 TALDO1P37837 337 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 ALDH3B2P48448 385 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 CLCN4P51793 760 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 DSTNP60981 165 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 POLR2LP62875 67 aaKnown RBP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 SRSF11Q05519 484 aaKnown RBP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 PTGES3Q15185 160 aaKnown RBP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 LRRC37A5PQ49AS3 106 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 TSSK4Q6SA08 328 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 PARM1Q6UWI2 310 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 ESPNLQ6ZVH7 1005 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 CHMP1BQ7LBR1 199 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 LAPTM4BQ86VI4 370 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 KRT73Q86Y46 540 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF557Q8N988 423 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 CXorf40AQ8TE69 158 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 TFGQ92734 400 aaPredicted RBP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 OTUB2Q96DC9 234 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 CHFRQ96EP1 664 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 SLC39A13Q96H72 371 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 TMEM19Q96HH6 336 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 FUBP3Q96I24 572 aaKnown RBP eCLIP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 PPP1R16AQ96I34 528 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 CCDC3Q9BQI4 270 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 TSSK6Q9BXA6 273 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 MKRN2Q9H000 416 aaKnown RBP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 SPNS1Q9H2V7 528 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 TMEM138Q9NPI0 162 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 ACOT13Q9NPJ3 140 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 HEBP1Q9NRV9 189 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF224Q9NZL3 707 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 CDV3Q9UKY7 258 aaKnown RBP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 DSPP15924 2871 aaKnown RBP4.75□□□□□ -1.65
CCDC39-204ENST00000476379 FAM86C2PA6NEL3 165 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 NOTOA8MTQ0 251 aa4.75□□□□□ -1.65
CCDC39-204ENST00000476379 EBLN1P0CF75 366 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms