RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 NTN3O00634 580 aaPredicted RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 ZBTB14O43829 449 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 MT-ND3P03897 115 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 ABHD2P08910 425 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 MBL2P11226 248 aaPredicted RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 STMN1P16949 149 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 ZFP36L2P47974 494 aaKnown RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 SLC1A6P48664 564 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 PITPNBP48739 271 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 ATP4BP51164 291 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 PAX8Q06710 450 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 MFGE8Q08431 387 aaPredicted RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 CD300CQ08708 224 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 HSPA14Q0VDF9 509 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 TSTA3Q13630 321 aaPredicted RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 MEF2DQ14814 521 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 MPPE1Q53F39 396 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 MUC21Q5SSG8 566 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 C1orf189Q5VU69 101 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 WDR49Q8IV35 697 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 RTL3Q8N8U3 475 aaKnown RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 LEMD2Q8NC56 503 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 GOLGA5Q8TBA6 731 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 CCDC47Q96A33 483 aaKnown RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 MRPL53Q96EL3 112 aaKnown RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 DTD2Q96FN9 168 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 RCHY1Q96PM5 261 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 ATF6BQ99941 703 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 UBXN6Q9BZV1 441 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 SLC26A1Q9H2B4 701 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 TMEM245Q9H330 911 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 LIME1Q9H400 295 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 TUBB1Q9H4B7 451 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 PRMT8Q9NR22 394 aaPredicted RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 PIGVQ9NUD9 493 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 GTSE1Q9NYZ3 720 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 TECRQ9NZ01 308 aaKnown RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 FETUBQ9UGM5 382 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 TRMT6Q9UJA5 497 aaKnown RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 APPL1Q9UKG1 709 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 STRAPQ9Y3F4 350 aaKnown RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 MAGI1Q96QZ7 1491 aaPredicted RBP3.38□□□□□ -1.87
SDHB-204ENST00000475049 KIAA0586Q9BVV6 1533 aa3.38□□□□□ -1.87
SDHB-204ENST00000475049 PTPRKQ15262 1439 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 PLB1Q6P1J6 1458 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 IGHV3OR16-10A0A075B7F0 116 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 MACROD2A1Z1Q3 448 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 EPM2AB3EWF7 344 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 DUSP11O75319 330 aaKnown RBP3.37□□□□□ -1.87
SDHB-204ENST00000475049 TXNDC12O95881 172 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 TBX6O95947 436 aaPredicted RBP3.37□□□□□ -1.87
SDHB-204ENST00000475049 FHP07954 510 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 ALDH3B1P43353 468 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 ACADSBP45954 432 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 CNN1P51911 297 aaKnown RBP3.37□□□□□ -1.87
SDHB-204ENST00000475049 HNRNPFP52597 415 aaKnown RBP3.37□□□□□ -1.87
SDHB-204ENST00000475049 SRP54P61011 504 aaKnown RBP3.37□□□□□ -1.87
SDHB-204ENST00000475049 RPL27P61353 136 aaKnown RBP3.37□□□□□ -1.87
SDHB-204ENST00000475049 FASTKQ14296 549 aaKnown RBP3.37□□□□□ -1.87
SDHB-204ENST00000475049 SLC17A1Q14916 467 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 P2RY14Q15391 338 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 CARTPTQ16568 116 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 GPAT3Q53EU6 434 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 PRAMEF7Q5VXH5 474 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 CARM1Q86X55 608 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 PARP8Q8N3A8 854 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 RUNDC3BQ96NL0 473 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 TAAR6Q96RI8 345 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 RUFY1Q96T51 708 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 OCR1Q9BZK8 76 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 LRRCC1Q9C099 1032 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 EGLN1Q9GZT9 426 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 ABCG8Q9H221 673 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 CXXC4Q9H2H0 198 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 DPEP3Q9H4B8 488 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 HEXA-AS1Q9H8Q6 139 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 JPT2Q9H910 190 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 KCNMB3Q9NPA1 279 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 THYN1Q9P016 225 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 VPS54Q9P1Q0 977 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 PAK5Q9P286 719 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 ERVK-18Q9QC07 812 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 EIF3KQ9UBQ5 218 aaKnown RBP3.37□□□□□ -1.87
SDHB-204ENST00000475049 CTSZQ9UBR2 303 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 COPS7AQ9UBW8 275 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 TSPAN16Q9UKR8 245 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 TEX264Q9Y6I9 313 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 LRRC7Q96NW7 1537 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 MAP3K4Q9Y6R4 1608 aa3.37□□□□□ -1.87
SDHB-204ENST00000475049 TNS2Q63HR2 1409 aa3.36□□□□□ -1.87
SDHB-204ENST00000475049 UHRF1BP1Q6BDS2 1440 aa3.36□□□□□ -1.87
SDHB-204ENST00000475049 CDK12Q9NYV4 1490 aaPredicted RBP3.36□□□□□ -1.87
SDHB-204ENST00000475049 TRBV2A0A0J9YWF9 115 aa3.36□□□□□ -1.87
SDHB-204ENST00000475049 CSDE1O75534 798 aaKnown RBP3.36□□□□□ -1.87
SDHB-204ENST00000475049 BCAS2O75934 225 aaPredicted RBP3.36□□□□□ -1.87
SDHB-204ENST00000475049 LIMK2P53671 638 aa3.36□□□□□ -1.87
SDHB-204ENST00000475049 GSTO1P78417 241 aa3.36□□□□□ -1.87
SDHB-204ENST00000475049 CCZ1BP86790 482 aa3.36□□□□□ -1.87
SDHB-204ENST00000475049 CCZ1P86791 482 aaPredicted RBP3.36□□□□□ -1.87
SDHB-204ENST00000475049 SIX1Q15475 284 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms