RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 RTCAO00442 366 aaKnown RBP14.09□□□□□ -0.15
VARS-223ENST00000474643 DYRK3O43781 588 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 ZFAND5O76080 213 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 OR4F21O95013 312 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 SNRPB2P08579 225 aaKnown RBP14.09□□□□□ -0.15
VARS-223ENST00000474643 COX7A2P14406 83 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 HMOX2P30519 316 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 MEOX1P50221 254 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 SLC18A1P54219 525 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 TRAF3Q13114 568 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 RUNX2Q13950 521 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 ELAVL1Q15717 326 aaKnown RBP14.09□□□□□ -0.15
VARS-223ENST00000474643 DEPDC1Q5TB30 811 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 ZNF468Q5VIY5 522 aaPredicted RBP14.09□□□□□ -0.15
VARS-223ENST00000474643 FRG2Q64ET8 278 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 BNC2Q6ZN30 1099 aaPredicted RBP14.09□□□□□ -0.15
VARS-223ENST00000474643 GPRIN3Q6ZVF9 776 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 MCEMP1Q8IX19 187 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 SREK1Q8WXA9 508 aaKnown RBP14.09□□□□□ -0.15
VARS-223ENST00000474643 DAZLQ92904 295 aaKnown RBP14.09□□□□□ -0.15
VARS-223ENST00000474643 ZBTB9Q96C00 473 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 QRFPRQ96P65 431 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 FRG2BQ96QU4 278 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 C1QTNF3Q9BXJ4 246 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 C12orf65Q9H3J6 166 aaKnown RBP14.09□□□□□ -0.15
VARS-223ENST00000474643 HPF1Q9NWY4 346 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 COPS7AQ9UBW8 275 aa14.09□□□□□ -0.15
VARS-223ENST00000474643 ACOT7O00154 380 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 CRCPO75575 148 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 TBX6O95947 436 aaPredicted RBP14.08□□□□□ -0.16
VARS-223ENST00000474643 ATP5A1P25705 553 aaKnown RBP14.08□□□□□ -0.16
VARS-223ENST00000474643 TRHRP34981 398 aaPredicted RBP14.08□□□□□ -0.16
VARS-223ENST00000474643 RFC3P40938 356 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 LIM2P55344 173 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 PLGLB1Q02325 96 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 ASPHQ12797 758 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 GGTA1PQ4G0N0 100 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 OR4C11Q6IEV9 310 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 LETMD1Q6P1Q0 360 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 HSDL2Q6YN16 418 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 GOLGA6L1Q8N7Z2 621 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 CDYL2Q8N8U2 506 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 ACOT4Q8N9L9 421 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 WDR20Q8TBZ3 569 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 SELENOMQ8WWX9 145 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 TLCD1Q96CP7 247 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 L3HYPDHQ96EM0 354 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 SERPINI1Q99574 410 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 PRDM7Q9NQW5 492 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 TRPS1Q9UHF7 1281 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 YARS2Q9Y2Z4 477 aaKnown RBP14.08□□□□□ -0.16
VARS-223ENST00000474643 TSC22D4Q9Y3Q8 395 aa14.08□□□□□ -0.16
VARS-223ENST00000474643 HMGB1P1B2RPK0 211 aaPredicted RBP14.07□□□□□ -0.16
VARS-223ENST00000474643 G3V2L1 256 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 FOXE1O00358 373 aaPredicted RBP14.07□□□□□ -0.16
VARS-223ENST00000474643 PPP6CO00743 305 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 PEX1O43933 1283 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 SASH3O75995 380 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 KRT6AP02538 564 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 KRT6BP04259 564 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 HIST1H1TP22492 207 aaPredicted RBP14.07□□□□□ -0.16
VARS-223ENST00000474643 CPN2P22792 545 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 PPP2R1BP30154 601 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 KRT6CP48668 564 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 NAGLUP54802 743 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 PKNOX1P55347 436 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 GPR85P60893 370 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 NAA20P61599 178 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 HSF1Q00613 529 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 LCP2Q13094 533 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 SLAMF1Q13291 335 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 SERTAD2Q14140 314 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 C10orf62Q5T681 223 aaPredicted RBP14.07□□□□□ -0.16
VARS-223ENST00000474643 LIPMQ5VYY2 423 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 CYP20A1Q6UW02 462 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 GDF7Q7Z4P5 450 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 SCUBE1Q8IWY4 988 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 BANPQ8N9N5 519 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 APCDD1LQ8NCL9 501 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 NFAM1Q8NET5 270 aaPredicted RBP14.07□□□□□ -0.16
VARS-223ENST00000474643 OR14A16Q8NHC5 309 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 METTL6Q8TCB7 284 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 AGAP11Q8TF27 550 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 FAM111AQ96PZ2 611 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 ZNF382Q96SR6 550 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 SORBS1Q9BX66 1292 aaKnown RBP14.07□□□□□ -0.16
VARS-223ENST00000474643 ALOXE3Q9BYJ1 711 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 OR8D2Q9GZM6 311 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 MID1IP1Q9NPA3 183 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 MED4Q9NPJ6 270 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 AHSPQ9NZD4 102 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 COQ3Q9NZJ6 369 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 KCMF1Q9P0J7 381 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 PPT2Q9UMR5 302 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 DAPP1Q9UN19 280 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 SLC12A4Q9UP95 1085 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 PLLPQ9Y342 182 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 CREBBPQ92793 2442 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 CACNA1DQ01668 2161 aa14.07□□□□□ -0.16
VARS-223ENST00000474643 ITPR2Q14571 2701 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms