RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 A0A0A6YYD5 115 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 IQANK1A0A1B0GTG1 560 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 PINLYPA6NC86 204 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 OR14I1A6ND48 311 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 LRRC14BA6NHZ5 514 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 FAM166BA8MTA8 275 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 OR10H2O60403 315 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 PDE9AO76083 593 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 GLSO94925 669 aaPredicted RBP18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 GPR75O95800 540 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 NR2F6P10588 404 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 ARL1P40616 181 aaPredicted RBP18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 ASPHQ12797 758 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 TSNAXIP1Q2TAA8 658 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 MRM1Q6IN84 353 aaKnown RBP18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 FAM47EQ6ZV65 393 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 NCCRP1Q6ZVX7 275 aaPredicted RBP18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 NUDT13Q86X67 352 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 FAM109AQ8N4B1 249 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 MMGT1Q8N4V1 131 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 MNS1Q8NEH6 495 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 WDR20Q8TBZ3 569 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 ASB5Q8WWX0 329 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 ISL2Q96A47 359 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 PPWD1Q96BP3 646 aaKnown RBP18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 C16orf45Q96MC5 204 aaPredicted RBP18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 SERPINI1Q99574 410 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 ZNF717Q9BY31 904 aaPredicted RBP18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 RNF11Q9Y3C5 154 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 ASB4Q9Y574 426 aa18.83■□□□□ 0.6
PDLIM4-206ENST00000474421 STX16-NPEPL1H3BU86 382 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 STX16O14662 325 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 SMIM24O75264 130 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 KRT38O76015 456 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 SEMA3DO95025 777 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 SIX3O95343 332 aaPredicted RBP18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 ACSL3O95573 720 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 FAM58BPP0C7Q3 252 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 COL6A2P12110 1019 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 CNTFP26441 200 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 SSTR2P30874 369 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 GALNSP34059 522 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 BSGP35613 385 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 MAGEA12P43365 314 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 CCNG1P51959 295 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 CDSNQ15517 529 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 SPRED3Q2MJR0 410 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 SLC29A4Q7RTT9 530 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 C9orf40Q8IXQ3 194 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 PTGR2Q8N8N7 351 aaPredicted RBP18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 FMO2Q99518 471 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 SPOCK3Q9BQ16 436 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 CNPPD1Q9BV87 410 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 CDC42EP4Q9H3Q1 356 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 NOL11Q9H8H0 719 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 PHF3Q92576 2039 aaKnown RBP18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 DCHS2Q6V1P9 2916 aa18.82■□□□□ 0.6
PDLIM4-206ENST00000474421 A0A0G2JMM0 328 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 A0A1W2PPB8 328 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 A0A1W2PRS3 328 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 KIR3DP1A8MWS1 328 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 G3V3Y1 287 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 BCKDKO14874 412 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 EEDO75530 441 aaKnown RBP18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 IGHG3P01860 377 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 ELAVL4P26378 380 aaKnown RBP18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 HYAL4Q2M3T9 481 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 SLC22A10Q63ZE4 541 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 RNF111Q6ZNA4 994 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 ACAD11Q709F0 780 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 PLD6Q8N2A8 252 aaKnown RBP18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 RND1Q92730 232 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 RIT1Q92963 219 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 PHF21BQ96EK2 531 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 PAFAH2Q99487 392 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 NTMT1Q9BV86 223 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 TRIM8Q9BZR9 551 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 AHSPQ9NZD4 102 aa18.81■□□□□ 0.6
PDLIM4-206ENST00000474421 FBN2P35556 2912 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 A0A1W2PR48 441 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 OR6C76A6NM76 312 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 C19orf84I3L1E1 186 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 OR7A17O14581 309 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 TMPRSS11DO60235 418 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 ZNF354AO60765 605 aaPredicted RBP18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 PRKRAO75569 313 aaKnown RBP18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 SLC35E2P0CK97 266 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 CCL3P10147 92 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 CHRNB4P30926 498 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 NEK2P51955 445 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 HERVK_113P63132 956 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 ERVK-8P63133 956 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 ZNF267Q14586 743 aaPredicted RBP18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 ZNF791Q3KP31 576 aaPredicted RBP18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 GLE1Q53GS7 698 aaKnown RBP18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 FRG2Q64ET8 278 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 TTC19Q6DKK2 380 aaPredicted RBP18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 OR52E8Q6IFG1 317 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 TMEM251Q8N6I4 163 aa18.8■□□□□ 0.6
PDLIM4-206ENST00000474421 IFT81Q8WYA0 676 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms