RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 GPR176Q14439 515 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 SEC23BQ15437 767 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 CCL15Q16663 113 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 GPAT4Q86UL3 456 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 OR4K1Q8NGD4 311 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 OR6C4Q8NGE1 309 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 SLC35A5Q9BS91 424 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 RAB23Q9ULC3 237 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 TRBV5-4A0A0C4DH59 114 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 LZTS3O60299 673 aaPredicted RBP17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 IFNW1P05000 195 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 PRKACAP17612 351 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 TYMPP19971 482 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 CDH4P55283 916 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 DBPQ10586 325 aaPredicted RBP17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 OCLNQ16625 522 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 CCL14Q16627 93 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 ZNF385BQ569K4 471 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 CAMKMTQ7Z624 323 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 IQCF1Q8N6M8 205 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 OR52N2Q8NGI0 321 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 SKA2Q8WVK7 121 aaPredicted RBP17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 GATAD2BQ8WXI9 593 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 BRI3BPQ8WY22 251 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 FUBP3Q96I24 572 aaKnown RBP eCLIP17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 MS4A4AQ96JQ5 239 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 TMEM121BQ9BXQ6 578 aaPredicted RBP17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 PPA2Q9H2U2 334 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 C1GALT1Q9NS00 363 aa17.71■□□□□ 0.43
ECHDC1-214ENST00000474289 TLX2O43763 284 aaPredicted RBP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 PRKYO43930 277 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 FZD6O60353 706 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 B4GALT3O60512 393 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 APOL3O95236 402 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 MPC2O95563 127 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 ETHE1O95571 254 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 CD160O95971 181 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 RHOCP08134 193 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 ANXA4P09525 319 aaPredicted RBP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 NNMTP40261 264 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 WDR5P61964 334 aaKnown RBP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 ARF5P84085 180 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 TUSC3Q13454 348 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 PLA1AQ53H76 456 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 MRPL10Q7Z7H8 261 aaKnown RBP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 ATG10Q9H0Y0 220 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 TMEM38AQ9H6F2 299 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 EMC7Q9NPA0 242 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 DNAJC11Q9NVH1 559 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 SPATA6Q9NWH7 488 aaPredicted RBP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 CUEDC1Q9NWM3 386 aaPredicted RBP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 KCTD5Q9NXV2 234 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 TVP23BQ9NYZ1 205 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 TESQ9UGI8 421 aaKnown RBP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 RNASET2O00584 256 aaKnown RBP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 PAHP00439 452 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 IFNA7P01567 189 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 STOMP27105 288 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 CD52P31358 61 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 TPBGQ13641 420 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 PUM1Q14671 1186 aaKnown RBP eCLIP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 ARSKQ6UWY0 536 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 UNC5DQ6UXZ4 953 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 ADGRG3Q86Y34 549 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 DOCK3Q8IZD9 2030 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 WDR20Q8TBZ3 569 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 EXO1Q9UQ84 846 aaKnown RBP17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 MAP4K5Q9Y4K4 846 aa17.7■□□□□ 0.42
ECHDC1-214ENST00000474289 BRCA2P51587 3418 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 MYADML2A6NDP7 307 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 SERPINI2O75830 405 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 SOD1P00441 154 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 NR2F6P10588 404 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 ANXA3P12429 323 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 CXCL3P19876 107 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 SSTR2P30874 369 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 FGF9P31371 208 aaPredicted RBP17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 GABRA5P31644 462 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 ASMTP46597 345 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 CCT3P49368 545 aaKnown RBP17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 SGSHP51688 502 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 ATP12AP54707 1039 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 EPHA5P54756 1037 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 PCBP3P57721 371 aaKnown RBP17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 IRF8Q02556 426 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 CHRNA6Q15825 494 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 SYT14P1Q58G82 188 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 ATXN7L2Q5T6C5 722 aaPredicted RBP17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 LDLRAD1Q5T700 205 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 GARNL3Q5VVW2 1013 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 ADNP2Q6IQ32 1131 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 ADGRF3Q8IZF5 1079 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 ZFP41Q8N8Y5 198 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 ATAD1Q8NBU5 361 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 SLC12A9Q9BXP2 914 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 SLC7A5P2Q9GIP4 190 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 HDHD2Q9H0R4 259 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 GHITMQ9H3K2 345 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 ZFYVE1Q9HBF4 777 aa17.69■□□□□ 0.42
ECHDC1-214ENST00000474289 SHISA3A0PJX4 238 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms