RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 C15orf38-AP3S2A0A0A6YYH1 394 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 MBD3L4A6NDZ8 208 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 MBD3L3A6NE82 208 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TRIM64A6NGJ6 449 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TRIM64BA6NI03 449 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 MBD3L5A6NJ08 208 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CD8B2A6NJW9 211 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 GOLGA8MH3BSY2 632 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 HRKO00198 91 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CES2O00748 559 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 SMAD7O15105 426 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CTNSO60931 367 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 LDB3O75112 727 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TRIM3O75382 744 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CLEC3AO75596 197 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 IL18BPO95998 194 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 IL2RAP01589 272 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 FGGP02679 453 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 IGKV3-11P04433 115 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 ENO2P09104 434 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CCDC175P0C221 793 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 ZNF10P21506 573 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CTSSP25774 331 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 GDF1P27539 372 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 GSTM2P28161 218 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 OPRM1P35372 400 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 AGFG1P52594 562 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 PLA2G16P53816 162 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 IL2P60568 153 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 ID2Q02363 134 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TBL3Q12788 808 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 ASPHQ12797 758 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 STX4Q12846 297 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 GPS1Q13098 491 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 DUSP8Q13202 625 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 SERTAD2Q14140 314 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 SLBPQ14493 270 aaKnown RBP eCLIP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CRYMQ14894 314 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 EFTUD2Q15029 972 aaKnown RBP eCLIP4.7□□□□□ -1.664e-9■■■□□ 16.7
SNRNP40-204ENST00000474025 DCST1Q5T197 706 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 ADNP2Q6IQ32 1131 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 ABHD17CQ6PCB6 329 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 PODNL1Q6PEZ8 512 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 PRSS57Q6UWY2 283 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TMIGD1Q6UXZ0 262 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 SLCO4C1Q6ZQN7 724 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CAPN12Q6ZSI9 719 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 VN1R5Q7Z5H4 357 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 P3H2Q8IVL5 708 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CNTN4Q8IWV2 1026 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 C9orf40Q8IXQ3 194 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 PM20D2Q8IYS1 436 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TXLNBQ8N3L3 684 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 LIX1Q8N485 282 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 RNF10Q8N5U6 811 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 GPATCH11Q8N954 259 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 PLPP7Q8NBV4 271 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 FAM13CQ8NE31 585 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 MCUQ8NE86 351 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TTLQ8NG68 377 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 OR2L5Q8NG80 312 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 OR5L2Q8NGL0 311 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 MBD3L2Q8NHZ7 208 aaPredicted RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 SLC22A8Q8TCC7 542 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 ZNF721Q8TF20 911 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CCT6BQ92526 530 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 HSPBAP1Q96EW2 488 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 PDLIM5Q96HC4 596 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 SIGLEC10Q96LC7 697 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 ZNF597Q96LX8 424 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 RUNDC3BQ96NL0 473 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 DACH2Q96NX9 599 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 SERINC2Q96SA4 455 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TIMP4Q99727 224 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 PIP5K1AQ99755 562 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 DOHHQ9BU89 302 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 BDH2Q9BUT1 245 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 ALOXE3Q9BYJ1 711 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TRIM54Q9BYV2 358 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 REXO4Q9GZR2 422 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 EPB41L4BQ9H329 900 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 UBQLN3Q9H347 655 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 HOMER3Q9NSC5 361 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 IARS2Q9NSE4 1012 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 GALNT8Q9NY28 637 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CNIH4Q9P003 139 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 COPS7AQ9UBW8 275 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 TRPS1Q9UHF7 1281 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 CNOT11Q9UKZ1 510 aaKnown RBP4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 SLC22A14Q9Y267 594 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 KCNE2Q9Y6J6 123 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 DOCK7Q96N67 2140 aa4.7□□□□□ -1.66
SNRNP40-204ENST00000474025 USF3Q68DE3 2245 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 FREM3P0C091 2139 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 SH3D21A4FU49 640 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 RNF212BA8MTL3 300 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 FGF17O60258 216 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 SMPD2O60906 423 aa4.69□□□□□ -1.66
SNRNP40-204ENST00000474025 LRATO95237 230 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms