RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 PDIA2Q13087 525 aaKnown RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 NNATQ16517 81 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 AP5B1Q2VPB7 878 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 DEFB113Q30KQ7 82 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 ADPRMQ3LIE5 342 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 WIPI1Q5MNZ9 446 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 POMZP3Q6PJE2 187 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 LUZP2Q86TE4 346 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 YRDCQ86U90 279 aaKnown RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 MYLK4Q86YV6 388 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 CIARTQ8N365 385 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 GOLM1Q8NBJ4 401 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 TTLQ8NG68 377 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 NEIL3Q8TAT5 605 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 RDH11Q8TC12 318 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 SLC22A8Q8TCC7 542 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 DIO2Q92813 273 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 RNASE6Q93091 150 aaKnown RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 SPACA9Q96E40 222 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 SGCZQ96LD1 299 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 GNRHR2Q96P88 292 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 TIMP4Q99727 224 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 YIPF4Q9BSR8 244 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 MS4A8Q9BY19 250 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 ZNF395Q9H8N7 513 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 SH2D2AQ9NP31 389 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 BOKQ9UMX3 212 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 TEX264Q9Y6I9 313 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 HRNRQ86YZ3 2850 aaPredicted RBP9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 MPDZO75970 2070 aa9.27□□□□□ -0.93
SCAMP3-205ENST00000472397 FREM3P0C091 2139 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 GOLGA6L10A0A0M3HER8 536 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 IQANK1A0A1B0GTG1 560 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 A0A1W2PPR1 153 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 LRRC14BA6NHZ5 514 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 HSPB2A8KAH6 182 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 KIAA1324LA8MWY0 1029 aaPredicted RBP9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 DVL2O14641 736 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 OR10H2O60403 315 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 HCN1O60741 890 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 EEDO75530 441 aaKnown RBP9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 STK16O75716 305 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 FAM155BO75949 473 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 GABRA1P14867 456 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 CD1DP15813 335 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 EPB42P16452 691 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 HIST1H1TP22492 207 aaPredicted RBP9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 FNTAP49354 379 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 HNMTP50135 292 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 RAP1GDS1P52306 607 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 CDKL1Q00532 357 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 SERTAD2Q14140 314 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 EFTUD2Q15029 972 aaKnown RBP eCLIP9.26□□□□□ -0.936e-6■■□□□ 13.1
SCAMP3-205ENST00000472397 HSPB2Q16082 182 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 PDK4Q16654 411 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 HYAL4Q2M3T9 481 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 STEAP4Q687X5 459 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 CLEC9AQ6UXN8 241 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 ADAMTSL2Q86TH1 951 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 LRRC8AQ8IWT6 810 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 PDIK1LQ8N165 341 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 FBXW8Q8N3Y1 598 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 C9orf106Q8NAJ2 232 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 PAQR8Q8TEZ7 354 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 ZNF473Q8WTR7 871 aaKnown RBP9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 FAM222BQ8WU58 562 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 SLC44A1Q8WWI5 657 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 PTCD3Q96EY7 689 aaKnown RBP9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 VPS39Q96JC1 886 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 KCNC2Q96PR1 638 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 PHACTR1Q9C0D0 580 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 NT5DC2Q9H857 520 aa9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 CHCHD2Q9Y6H1 151 aaPredicted RBP9.26□□□□□ -0.93
SCAMP3-205ENST00000472397 FLNAP21333 2647 aaKnown RBP9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 MED12Q93074 2177 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 FAM221AA4D161 298 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 CLCA1A8K7I4 914 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 SUPT3HB4E1H0 165 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 UBXN8O00124 270 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 SUPT3HO75486 399 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 LY6G6DO95868 133 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 EPPINO95925 133 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 CLPSP04118 112 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 S100BP04271 92 aaPredicted RBP9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 CT62P0C5K7 136 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 COX7A2P14406 83 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 ALOX15P16050 662 aaPredicted RBP9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 SSTR1P30872 391 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 SLCO1A2P46721 670 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 MASP1P48740 699 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 NEK2P51955 445 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 RPS13P62277 151 aaKnown RBP9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 TGM3Q08188 693 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 CRYZQ08257 329 aaKnown RBP9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 DLG1Q12959 904 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 RCN2Q14257 317 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 HIST2H2ACQ16777 129 aaPredicted RBP9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 MPEG1Q2M385 716 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 HIST2H2AA3Q6FI13 130 aa9.25□□□□□ -0.93
SCAMP3-205ENST00000472397 OR4C11Q6IEV9 310 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms