RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	TMEM185A	Q8NFB2	350 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	OR8H1	Q8NGG4	311 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	KIAA1524	Q8TCG1	905 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	P3H4	Q92791	437 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	MRPL24	Q96A35	216 aa	Known RBP	3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	PNPLA2	Q96AD5	504 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	TMEM186	Q96B77	213 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	TAAR6	Q96RI8	345 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	TNFRSF13C	Q96RJ3	184 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	RUFY1	Q96T51	708 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	CHCHD5	Q9BSY4	110 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	SPX	Q9BT56	116 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	FUNDC2	Q9BWH2	189 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	GTSE1	Q9NYZ3	720 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	VPS54	Q9P1Q0	977 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	KCNN3	Q9UGI6	736 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	NARF	Q9UHQ1	456 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	RARRES3	Q9UL19	164 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	SPATA2	Q9UM82	520 aa		3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	DIMT1	Q9UNQ2	313 aa	Known RBP	3.11	□□□□□ -1.91
PTCD3-209	ENST00000472044	TRGV8	A0A0C4DH27	118 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044		A0A1B0GU03	582 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	LOC390937	A0A1W2PQ73	354 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	SYCE3	A1L190	88 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	TMCO5B	A8MYB1	307 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	NEDD8-MDP1	E9PL57	170 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	HSF2BP	O75031	334 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	CALCA	P01258	141 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	CXCL10	P02778	98 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	FCER2	P06734	321 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	EZR	P15311	586 aa	Known RBP	3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	AHCY	P23526	432 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	LMO2	P25791	158 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	ETV5	P41161	510 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	MTIF2	P46199	727 aa	Known RBP	3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	GALK2	Q01415	458 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	RAPSN	Q13702	412 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	EXOSC7	Q15024	291 aa	Known RBP	3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	TRADD	Q15628	312 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	MUC21	Q5SSG8	566 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	RTL6	Q6ICC9	239 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	CDC42EP5	Q6NZY7	148 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	C1orf186	Q6ZWK4	172 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	MIER3	Q7Z3K6	550 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	NUFIP2	Q7Z417	695 aa	Known RBP	3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	GPR142	Q7Z601	462 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	ADAMTSL2	Q86TH1	951 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	SLC22A16	Q86VW1	577 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	BATF2	Q8N1L9	274 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	ABHD12	Q8N2K0	398 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	PARP8	Q8N3A8	854 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	ZNF781	Q8N8C0	355 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	BANP	Q8N9N5	519 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	C17orf47	Q8NEP4	570 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	CHPT1	Q8WUD6	406 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	SLC13A3	Q8WWT9	602 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	ESAM	Q96AP7	390 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	CXorf58	Q96LI9	332 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	SPATA13	Q96N96	652 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	ANKRD27	Q96NW4	1050 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	JPH2	Q9BR39	696 aa	Predicted RBP	3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	ZNF577	Q9BSK1	485 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	CCDC28B	Q9BUN5	200 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	PAK5	Q9P286	719 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	FETUB	Q9UGM5	382 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	KLK13	Q9UKR3	277 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	DNPEP	Q9ULA0	475 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	RPH3A	Q9Y2J0	694 aa	Predicted RBP	3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	MOB4	Q9Y3A3	225 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	STRAP	Q9Y3F4	350 aa	Known RBP	3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	NPC1L1	Q9UHC9	1359 aa		3.1	□□□□□ -1.91
PTCD3-209	ENST00000472044	CCDC69	A6NI79	296 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	MEI4	A8MW99	385 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	PDHX	O00330	501 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	TXNL1	O43396	289 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	LRP3	O75074	770 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	ANXA9	O76027	345 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	HPR	P00739	348 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	PGK2	P07205	417 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	KRT5	P13647	590 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	FOSL2	P15408	326 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	ACP1	P24666	158 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	OXTR	P30559	389 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	PITPNB	P48739	271 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	ATP4B	P51164	291 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	NDST1	P52848	882 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	SRP54	P61011	504 aa	Known RBP	3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	GAMT	Q14353	236 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	SIX1	Q15475	284 aa	Predicted RBP	3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	GPAT3	Q53EU6	434 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	DCAF12	Q5T6F0	453 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	DDI2	Q5TDH0	399 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	RAB12	Q6IQ22	244 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	GPRIN3	Q6ZVF9	776 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	CATSPER3	Q86XQ3	398 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	C4orf32	Q8N8J7	132 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	ARL10	Q8N8L6	244 aa		3.09	□□□□□ -1.91
PTCD3-209	ENST00000472044	COLGALT1	Q8NBJ5	622 aa		3.09	□□□□□ -1.91

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